Commits · release/107 · ensembl-gh-mirror / ensembl

This project is mirrored from https://:*****@github.com/Ensembl/ensembl.git. Pull mirroring updated Feb 05, 2023.

20 Apr, 2022 2 commits
- Merge pull request #610 from Ensembl/fix/gitlab_ci_master_main · 5f398992
  sgiorgetti authored Apr 20, 2022
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Fix Gitlab CI pipeline
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  5f398992
- Fix Gitlab CI pipeline · 84586b91
  Stefano Giorgetti authored Apr 20, 2022
  
  84586b91
11 Mar, 2022 2 commits
- Merge pull request #608 from Ensembl/fix/xref_backwards_compatibility · a541c4b5
  sgiorgetti authored Mar 11, 2022
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Use old parsers when needed
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  a541c4b5
- Re-add RefSeq-peptide source to vertebrates · ef7ed499
  Tamara El Naboulsi authored Mar 11, 2022
  
  ef7ed499
09 Mar, 2022 1 commit
- Use old parsers when needed · ff4636c1
  Tamara El Naboulsi authored Mar 09, 2022
  
  ff4636c1
15 Feb, 2022 2 commits
- Merge pull request #606 from Ensembl/fix/xref_parsers_names · be69e922
  sgiorgetti authored Feb 15, 2022
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Fix package name for renamed parsers
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  be69e922
- Fix package name for renamed parsers · 3ffac601
  Tamara El Naboulsi authored Feb 15, 2022
  
  3ffac601
17 Jan, 2022 1 commit
- Merge pull request #605 from Ensembl/readme_update/107 · 040e2347
  Tamara El Naboulsi authored Jan 17, 2022
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Update Travis and Coveralls badges to 107
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  040e2347
12 Jan, 2022 1 commit
- Update Travis and Coveralls badges to 107 · 1cc8afb9
  Tamara El Naboulsi authored Jan 12, 2022
  
  1cc8afb9
11 Jan, 2022 1 commit
- Merge pull request #591 from Ensembl/feature/trans_canonical_attrib · ff90d081
  sgiorgetti authored Jan 11, 2022
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Feature/trans canonical attrib
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  ff90d081
10 Jan, 2022 2 commits
- Merge pull request #595 from Ensembl/feature/xref_preparse · a7863788
  Tamara El Naboulsi authored Jan 10, 2022
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Feature/xref preparse. Merging this to go with the merge in ensembl-production repo related to this project.
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  a7863788
- Merge pull request #603 from Ensembl/copyright/2022 · 938e9991
  Tamara El Naboulsi authored Jan 10, 2022
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Yearly copyright update - 2022
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  938e9991
05 Jan, 2022 1 commit
- Yearly copyright update - 2022 · 279f5496
  Tamara El Naboulsi authored Jan 05, 2022
  
  279f5496
20 Dec, 2021 3 commits
- Merge pull request #602 from Ensembl/bugfix/fuzzy_match_master · f088c4f1
  Tamara El Naboulsi authored Dec 20, 2021
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Bugfix/fuzzy match master
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  f088c4f1
- Merge branch 'master' of https://github.com/Ensembl/ensembl into feature/trans_canonical_attrib · dca54cb2
  Tamara El Naboulsi authored Dec 20, 2021
  
  dca54cb2
- Re-adding fix for canonical transcript bug · 9c04c61e
  Tamara El Naboulsi authored Dec 20, 2021
  
  9c04c61e
15 Dec, 2021 4 commits
- fix up whitespace because this is on master and will carry forward · 364daf2d
  Brandon Walts authored Dec 15, 2021
  
  364daf2d
- Set $cs after fetch by fuzzy match · c46928e2
  Manoj Pandian Sakthivel authored Dec 15, 2021
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This change fixes the issue reported in the following ticket:
https://helpdesk.ebi.ac.uk/Ticket/Display.html?id=552711
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  c46928e2
- Merge pull request #593 from sgiorgetti/feature/seq-region-mapping-index · 263365b3
  sgiorgetti authored Dec 15, 2021
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Feature/seq region mapping index
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  263365b3
- Merge pull request #596 from sgiorgetti/bugfix/ens_master_renamed · ca7066bd
  sgiorgetti authored Dec 15, 2021
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Bugfix/ens master renamed
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  ca7066bd
14 Dec, 2021 1 commit
- Moved canonical test and removed added gene · 1d669064
  Tamara El Naboulsi authored Dec 14, 2021
  
  1d669064
13 Dec, 2021 4 commits
- Merge branch 'master' of https://github.com/Ensembl/ensembl into feature/trans_canonical_attrib · 89c9f414
  Tamara El Naboulsi authored Dec 13, 2021
  
  89c9f414
- Fix release issue · 9d37cddb
  Stefano Giorgetti authored Dec 13, 2021
  
  9d37cddb
- Merge branch 'Ensembl:release/105' into bugfix/ens_master_renamed · 534a56c6
  sgiorgetti authored Dec 13, 2021
  
  534a56c6
- Merge pull request #594 from sgiorgetti/bugfix/cultivars_protein_trees · b000d7c8
  sgiorgetti authored Dec 13, 2021
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Bugfix/cultivars protein trees
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  b000d7c8
09 Dec, 2021 1 commit
- Fixed git-ensembl cmd line · 31beacb2
  Stefano Giorgetti authored Dec 09, 2021
  
  31beacb2
07 Dec, 2021 2 commits
- fixed comment · 41603640
  Stefano Giorgetti authored Dec 07, 2021
  
  41603640
- Fixed git clone cmd line · ad0dafba
  Stefano Giorgetti authored Dec 07, 2021
  
  ad0dafba
30 Nov, 2021 1 commit
- Increase gene_tree_root.clusterset_id column size for compara test DB · 6f8703a5
  Stefano Giorgetti authored Nov 30, 2021
  
  6f8703a5
26 Nov, 2021 2 commits
- Reverting last change as it causes test suite to fail · fa7d0027
  Tamara El Naboulsi authored Nov 26, 2021
  
  fa7d0027
- Fix canonical transcript bug and adjust gene test · b39f2a10
  Tamara El Naboulsi authored Nov 26, 2021
  
  b39f2a10
25 Nov, 2021 3 commits
- Revert unneededchange · bb58b372
  Tamara El Naboulsi authored Nov 25, 2021
  
  bb58b372
- Add is_canonical attrib id + select canonical changes · e1d36882
  Tamara El Naboulsi authored Nov 25, 2021
  
  e1d36882
- Fixing transcript canonical tests · 4176a5fb
  Tamara El Naboulsi authored Nov 25, 2021
  
  4176a5fb
24 Nov, 2021 3 commits
- Testing transcript store method with canonical attrib · d0a18e9d
  Tamara El Naboulsi authored Nov 24, 2021
  
  d0a18e9d
- Added test for storing gene with canonical transcript · 2aafb28e
  Tamara El Naboulsi authored Nov 24, 2021
  
  2aafb28e
- Updating canonical flag in both Gene and Transcript · 9683d400
  Tamara El Naboulsi authored Nov 24, 2021
  
  9683d400
16 Nov, 2021 2 commits
- add human, mouse and plant specific config · 964ab1d5
  Magali Ruffier authored Nov 16, 2021
  
  964ab1d5
- create separate parsers for pre-parsed data · 7294a836
  Magali Ruffier authored Nov 16, 2021
  
  7294a836
05 Nov, 2021 1 commit
- add missing columns · 181e9cb9
  Magali Ruffier authored Nov 05, 2021
  
  181e9cb9