=head1 LICENSE Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute Copyright [2016-2019] EMBL-European Bioinformatics Institute Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. =cut =head1 CONTACT Please email comments or questions to the public Ensembl developers list at . Questions may also be sent to the Ensembl help desk at . =cut =head1 NAME Bio::EnsEMBL::DBSQL::SOTermAdaptor =head1 DESCRIPTION A specialization of Bio::EnsEMBL::DBSQL::OntologyTermAdaptor, specifically for Sequence ontology (SO) terms. See the documentation of Bio::EnsEMBL::DBSQL::OntologyTermAdaptor for further information. =head1 METHODS =cut package Bio::EnsEMBL::DBSQL::SOTermAdaptor; use strict; use warnings; use base qw( Bio::EnsEMBL::DBSQL::OntologyTermAdaptor ); =head2 new Arg [1] : Bio::EnsEMBL::DBSQL::DBAdaptor Argument required for parent class Bio::EnsEMBL::DBSQL::BaseAdaptor. Description : Creates an ontology term adaptor for SO terms. Example : my $go_adaptor = Bio::EnsEMBL::DBSQL::SOTermAdaptor->new( $dba ); Return type : Bio::EnsEMBL::DBSQL::SOTermAdaptor =cut sub new { my ( $proto, $dba ) = @_; my $this = $proto->SUPER::new( $dba, 'SO' ); return $this; } 1;