This project is mirrored from https://github.com/Ensembl/format-transcriber. Pull mirroring updated .
  1. 19 Feb, 2018 1 commit
  2. 04 Dec, 2017 1 commit
  3. 08 Nov, 2017 1 commit
  4. 24 Feb, 2017 1 commit
  5. 14 Jul, 2016 1 commit
  6. 05 Jul, 2016 1 commit
  7. 21 Jun, 2016 3 commits
  8. 20 Jun, 2016 2 commits
  9. 15 Jun, 2016 1 commit
  10. 14 Jun, 2016 1 commit
  11. 09 Jun, 2016 2 commits
  12. 31 Mar, 2016 1 commit
  13. 30 Mar, 2016 1 commit
  14. 18 Feb, 2016 1 commit
    • Matthew Laird's avatar
      Experimental format conversion. · 3938c229
      Matthew Laird authored
      Will likely only work GTF<->GFF3, metadata may not be formatted correctly, and if other format conversions are attempted it will likely explode spectacularly.
      3938c229
  15. 03 Feb, 2016 2 commits
    • Matthew Laird's avatar
      - Removed debugging output from transcript_id callback · cb54a8f4
      Matthew Laird authored
      - Created a GTF parser to enable properly parsing metadata in this format
      cb54a8f4
    • Matthew Laird's avatar
      - Updated documentation to describe '_all' filter macro · 502701f0
      Matthew Laird authored
      - Added transcript_id filter to mirror gene_id to transcript_id in gene records to make tools such as RNA-SeqC happy with our GTF format
      - Updated GTF processor to properly format GTF on write with proper delimiters for attributes field
      - Removed some debugging output left in FileHandle object
      - Fixed issue where parser object type was being overwritten on the actual parsing of a file
      502701f0
  16. 15 Jan, 2016 1 commit
  17. 13 Jan, 2016 2 commits
  18. 12 Jan, 2016 1 commit
  19. 08 Jan, 2016 1 commit
  20. 06 Jan, 2016 1 commit
  21. 05 Jan, 2016 2 commits
  22. 04 Jan, 2016 5 commits
  23. 21 Dec, 2015 7 commits