diff --git a/src/zmapWindow/zmapWindow.c b/src/zmapWindow/zmapWindow.c index a6a37ce7aeefc8a6db102111c6a195d7f1aabbfa..2337943f0700aa9884edb0d48b00fca7c95af58b 100755 --- a/src/zmapWindow/zmapWindow.c +++ b/src/zmapWindow/zmapWindow.c @@ -26,9 +26,9 @@ * * Exported functions: See ZMap/zmapWindow.h * HISTORY: - * Last edited: Feb 9 14:19 2009 (rds) + * Last edited: Feb 11 11:55 2009 (rds) * Created: Thu Jul 24 14:36:27 2003 (edgrif) - * CVS info: $Id: zmapWindow.c,v 1.268 2009-02-09 14:55:08 rds Exp $ + * CVS info: $Id: zmapWindow.c,v 1.269 2009-02-11 15:14:00 rds Exp $ *------------------------------------------------------------------- */ @@ -1244,11 +1244,7 @@ void zMapWindowUpdateInfoPanel(ZMapWindow window, select.feature_desc.feature_description = zmapWindowFeatureDescription(feature) ; - -#ifdef ED_G_NEVER_INCLUDE_THIS_CODE - style = zMapFeatureGetStyle((ZMapFeatureAny)feature) ; -#endif /* ED_G_NEVER_INCLUDE_THIS_CODE */ - style = zmapWindowStyleTableFind(set_data->style_table, feature->style_id) ; + style = zmapWindowItemFeatureSetStyleFromID(set_data, feature->style_id) ; select.feature_desc.feature_set_description = zmapWindowFeatureSetDescription(zMapStyleGetID(style), style) ; diff --git a/src/zmapWindow/zmapWindowColBump.c b/src/zmapWindow/zmapWindowColBump.c index 7c7a61b780b164f7695d44c5c1b4d79432698fe2..3b2405b54236ee59240d22a86dc1a76b1311a6f9 100755 --- a/src/zmapWindow/zmapWindowColBump.c +++ b/src/zmapWindow/zmapWindowColBump.c @@ -27,9 +27,9 @@ * * Exported functions: See zmapWindow_P.h * HISTORY: - * Last edited: Feb 10 17:29 2009 (edgrif) + * Last edited: Feb 11 13:18 2009 (rds) * Created: Tue Sep 4 10:52:09 2007 (edgrif) - * CVS info: $Id: zmapWindowColBump.c,v 1.31 2009-02-10 17:31:01 edgrif Exp $ + * CVS info: $Id: zmapWindowColBump.c,v 1.32 2009-02-11 15:14:12 rds Exp $ *------------------------------------------------------------------- */ @@ -375,7 +375,7 @@ void zmapWindowColumnBumpRange(FooCanvasItem *column_item, ZMapStyleOverlapMode feature = g_object_get_data(G_OBJECT(column_item), ITEM_FEATURE_DATA) ; zMapAssert(feature) ; - style = zmapWindowStyleTableFind(set_data->style_table, feature->style_id) ; + style = zmapWindowItemFeatureSetStyleFromID(set_data, feature->style_id) ; } else style = zmapWindowItemFeatureSetColumnStyle(set_data) ; @@ -815,7 +815,7 @@ static void bumpColCB(gpointer data, gpointer user_data) set_data = g_object_get_data(G_OBJECT(column_group), ITEM_FEATURE_SET_DATA) ; zMapAssert(set_data) ; - style = zmapWindowStyleTableFind(set_data->style_table, feature->style_id) ; + style = zmapWindowItemFeatureSetStyleFromID(set_data, feature->style_id) ; if (!(bump_data->bump_all) && bump_data->bumped_style != style) return ; @@ -1084,7 +1084,7 @@ static void makeNameListCB(gpointer data, gpointer user_data) set_data = g_object_get_data(G_OBJECT(column_group), ITEM_FEATURE_SET_DATA) ; zMapAssert(set_data) ; - style = zmapWindowStyleTableFind(set_data->style_table, feature->style_id) ; + style = zmapWindowItemFeatureSetStyleFromID(set_data, feature->style_id) ; if (!(complex->bump_all) && complex->bumped_style != style) return ; @@ -1170,7 +1170,7 @@ static void makeNameListStrandedCB(gpointer data, gpointer user_data) set_data = g_object_get_data(G_OBJECT(column_group), ITEM_FEATURE_SET_DATA) ; zMapAssert(set_data) ; - style = zmapWindowStyleTableFind(set_data->style_table, feature->style_id) ; + style = zmapWindowItemFeatureSetStyleFromID(set_data, feature->style_id) ; if (!(complex->bump_all) && complex->bumped_style != style) return ; @@ -1489,7 +1489,6 @@ static void addGapsCB(gpointer data, gpointer user_data) FooCanvasItem *item = (FooCanvasItem *)(list_item->data) ; ZMapFeature feature = NULL ; ZMapWindowItemFeatureSetData set_data = NULL; - GHashTable *style_table = NULL; ZMapFeatureTypeStyle style = NULL; FooCanvasGroup *set_group ; @@ -1503,9 +1502,8 @@ static void addGapsCB(gpointer data, gpointer user_data) zMapAssert(set_group) ; set_data = g_object_get_data(G_OBJECT(set_group), ITEM_FEATURE_SET_DATA) ; zMapAssert(set_data) ; - style_table = set_data->style_table ; - style = zmapWindowStyleTableFind(style_table, feature->style_id) ; - zMapAssert(style) ; + + style = zmapWindowItemFeatureSetStyleFromID(set_data, feature->style_id) ; /* Only display gaps on bumping and if the alignments have gaps. */ if (zMapStyleGetMode(style) == ZMAPSTYLE_MODE_ALIGNMENT) @@ -1758,7 +1756,7 @@ static void NEWaddMultiBackgrounds(gpointer data, gpointer user_data) return ; curr_id = curr_feature->original_id ; - curr_style = zmapWindowStyleTableFind(set_data->style_table, curr_feature->style_id) ; + curr_style = zmapWindowItemFeatureSetStyleFromID(set_data, curr_feature->style_id) ; /* Calculate horizontal mid point of this column of matches from the first item, @@ -1894,7 +1892,7 @@ static void NEWaddMultiBackgrounds(gpointer data, gpointer user_data) else curr_start = curr_feature->feature.homol.y1 ; - curr_style = zmapWindowStyleTableFind(set_data->style_table, curr_feature->style_id) ; + curr_style = zmapWindowItemFeatureSetStyleFromID(set_data, curr_feature->style_id) ; /* We only do aligns (remember that there can be different types in a single col) * and only those for which joining of homols was requested. */ @@ -2971,7 +2969,7 @@ static void moveItemCB(gpointer data, gpointer user_data) zMapAssert(feature) ; /* Get hold of the style. */ - style = zmapWindowStyleTableFind(col_data->set_data->style_table, feature->style_id) ; + style = zmapWindowItemFeatureSetStyleFromID(col_data->set_data, feature->style_id) ; /* x1, x2 always needed so might as well get y coords as well because foocanvas will have * calculated them anyway. */ diff --git a/src/zmapWindow/zmapWindowDrawFeatures.c b/src/zmapWindow/zmapWindowDrawFeatures.c index 8be21203e7b1c21cc5cce1b1c2cd6c7c05f2a55d..353b8e92abaf47572b0ae1677594fdca8f8d21c9 100755 --- a/src/zmapWindow/zmapWindowDrawFeatures.c +++ b/src/zmapWindow/zmapWindowDrawFeatures.c @@ -26,9 +26,9 @@ * * Exported functions: * HISTORY: - * Last edited: Feb 9 14:26 2009 (rds) + * Last edited: Feb 11 11:37 2009 (rds) * Created: Thu Jul 29 10:45:00 2004 (rnc) - * CVS info: $Id: zmapWindowDrawFeatures.c,v 1.227 2009-02-09 14:55:08 rds Exp $ + * CVS info: $Id: zmapWindowDrawFeatures.c,v 1.228 2009-02-11 15:13:28 rds Exp $ *------------------------------------------------------------------- */ @@ -1315,14 +1315,10 @@ static void ProcessFeature(gpointer key, gpointer data, gpointer user_data) set_data = g_object_get_data(G_OBJECT(column_group), ITEM_FEATURE_SET_DATA) ; zMapAssert(set_data) ; - - /* Get the styles table from the column and look for the features style.... */ - if (!(style = zmapWindowStyleTableFind(set_data->style_table, feature->style_id))) - { - style = zMapFindStyle(featureset_data->styles, feature->style_id) ; - style = zmapWindowStyleTableAddCopy(set_data->style_table, style) ; - } + style = zMapFindStyle(featureset_data->styles, feature->style_id) ; + + style = zmapWindowItemFeatureSetStyleFromStyle(set_data, style) ; feature_item = zmapWindowFeatureDraw(window, style, column_group, feature) ; diff --git a/src/zmapWindow/zmapWindowFeature.c b/src/zmapWindow/zmapWindowFeature.c index bef064f92bd4dc87d4fb643015a005a50ea6276d..1eff4f462c3589de492e68d574bd6a027cd9181d 100755 --- a/src/zmapWindow/zmapWindowFeature.c +++ b/src/zmapWindow/zmapWindowFeature.c @@ -28,9 +28,9 @@ * * Exported functions: See zmapWindow_P.h * HISTORY: - * Last edited: Feb 9 12:23 2009 (rds) + * Last edited: Feb 11 11:41 2009 (rds) * Created: Mon Jan 9 10:25:40 2006 (edgrif) - * CVS info: $Id: zmapWindowFeature.c,v 1.153 2009-02-09 14:55:08 rds Exp $ + * CVS info: $Id: zmapWindowFeature.c,v 1.154 2009-02-11 15:14:38 rds Exp $ *------------------------------------------------------------------- */ @@ -502,30 +502,11 @@ FooCanvasItem *zmapWindowFeatureDraw(ZMapWindow window, ZMapFeature feature) { FooCanvasItem *new_feature = NULL ; - -#ifdef ED_G_NEVER_INCLUDE_THIS_CODE - ZMapWindowItemFeatureSetData set_data ; -#endif /* ED_G_NEVER_INCLUDE_THIS_CODE */ - ZMapFeatureContext context ; ZMapFeatureAlignment alignment ; ZMapFeatureBlock block ; ZMapFeatureSet set ; -#ifdef ED_G_NEVER_INCLUDE_THIS_CODE - - /* THIS CODE NEEDS TO GO IN THE CALLER FUNC. */ - set_data = g_object_get_data(G_OBJECT(set_group), ITEM_FEATURE_SET_DATA) ; - zMapAssert(set_data) ; - - /* Get the styles table from the column and look for the features style.... */ - if (!(style = zmapWindowStyleTableFind(set_data->style_table, feature->style_id))) - { - style = zMapFindStyle(window->read_only_styles, feature->style_id); - zmapWindowStyleTableAdd(set_data->style_table, style) ; - } -#endif /* ED_G_NEVER_INCLUDE_THIS_CODE */ - /* Users will often not want to see what is on the reverse strand, style specifies what should * be shown. */ @@ -1666,18 +1647,14 @@ void zmapMakeItemMenu(GdkEventButton *button_event, ZMapWindow window, FooCanvas zMapAssert(feature) ; { - GHashTable *style_table = NULL; FooCanvasGroup *column_group = NULL ; ZMapWindowItemFeatureSetData set_data = NULL; - column_group = zmapWindowContainerGetParentContainerFromItem(item) ; - set_data = g_object_get_data(G_OBJECT(column_group), ITEM_FEATURE_SET_DATA); + set_data = g_object_get_data(G_OBJECT(column_group), ITEM_FEATURE_SET_DATA); zMapAssert(set_data); - style_table = set_data->style_table; - /* Get the styles table from the column and look for the features style.... */ - style = zmapWindowStyleTableFind(style_table, (feature->style_id)) ; + style = zmapWindowItemFeatureSetStyleFromID(set_data, feature->style_id); } @@ -2562,7 +2539,7 @@ FooCanvasItem *addNewCanvasItem(ZMapWindow window, FooCanvasGroup *feature_group zMapAssert(feature_set) ; set_data = g_object_get_data(G_OBJECT(feature_group), ITEM_FEATURE_SET_DATA) ; - style = zmapWindowStyleTableFind(set_data->style_table, feature->style_id) ; + style = zmapWindowItemFeatureSetStyleFromID(set_data, feature->style_id) ; container_features = zmapWindowContainerGetFeatures(feature_group); column_is_empty = !(container_features->item_list); @@ -2572,21 +2549,10 @@ FooCanvasItem *addNewCanvasItem(ZMapWindow window, FooCanvasGroup *feature_group if (bump_col) { - -#ifdef ED_G_NEVER_INCLUDE_THIS_CODE - if ((set_data = g_object_get_data(G_OBJECT(feature_group), ITEM_FEATURE_SET_DATA))) + if((bump_mode = zMapStyleGetOverlapMode(style)) != ZMAPOVERLAP_COMPLETE) { -#endif /* ED_G_NEVER_INCLUDE_THIS_CODE */ - - if((bump_mode = zMapStyleGetOverlapMode(style)) != ZMAPOVERLAP_COMPLETE) - { - zmapWindowColumnBump(FOO_CANVAS_ITEM(feature_group), bump_mode); - } - -#ifdef ED_G_NEVER_INCLUDE_THIS_CODE + zmapWindowColumnBump(FOO_CANVAS_ITEM(feature_group), bump_mode); } -#endif /* ED_G_NEVER_INCLUDE_THIS_CODE */ - if (column_is_empty) zmapWindowColOrderPositionColumns(window); diff --git a/src/zmapWindow/zmapWindowItemFactory.c b/src/zmapWindow/zmapWindowItemFactory.c index 09e5c7af458c1fe41242b2e010202663995908e0..f90bd2cb5484e021c833d1e8f7c889d19e0e1372 100755 --- a/src/zmapWindow/zmapWindowItemFactory.c +++ b/src/zmapWindow/zmapWindowItemFactory.c @@ -28,9 +28,9 @@ * * Exported functions: See zmapWindowItemFactory.h * HISTORY: - * Last edited: Feb 3 14:55 2009 (rds) + * Last edited: Feb 11 13:18 2009 (rds) * Created: Mon Sep 25 09:09:52 2006 (rds) - * CVS info: $Id: zmapWindowItemFactory.c,v 1.55 2009-02-03 14:57:33 rds Exp $ + * CVS info: $Id: zmapWindowItemFactory.c,v 1.56 2009-02-11 15:12:50 rds Exp $ *------------------------------------------------------------------- */ @@ -330,7 +330,6 @@ FooCanvasItem *zmapWindowFToIFactoryRunSingle(ZMapWindowFToIFactory factory, ZMapWindowItemFeatureSetData set_data = NULL; ZMapFeatureTypeStyle style = NULL; ZMapStyleMode style_mode = ZMAPSTYLE_MODE_INVALID ; - GHashTable *style_table = NULL; gboolean no_points_in_block = TRUE; /* check here before they get called. I'd prefer to only do this * once per factory rather than once per Run! */ @@ -345,9 +344,8 @@ FooCanvasItem *zmapWindowFToIFactoryRunSingle(ZMapWindowFToIFactory factory, set_data = g_object_get_data(G_OBJECT(parent_container), ITEM_FEATURE_SET_DATA) ; zMapAssert(set_data) ; - style_table = set_data->style_table; /* Get the styles table from the column and look for the features style.... */ - if (!(style = zmapWindowStyleTableFind(style_table, feature->style_id))) + if (!(style = zmapWindowItemFeatureSetStyleFromID(set_data, feature->style_id))) { zMapAssertNotReached(); }