diff --git a/src/zmapUtils/Makefile.am b/src/zmapUtils/Makefile.am
index d25ebfee5dc5fe3ccaa84cdeef3c1b176560d6d1..c0053a7e9a927d95ec68621b3154d4f6494f4fc4 100755
--- a/src/zmapUtils/Makefile.am
+++ b/src/zmapUtils/Makefile.am
@@ -6,7 +6,6 @@ SUBDIRS = . tests
 noinst_LTLIBRARIES = libZMapUtils.la
 
 libZMapUtils_la_SOURCES = zmapUtilsConfig.c \
-zmapConfigLoader.c \
 zmapGUITreeView_I.h \
 zmapCmdLineArgs_P.h \
 zmapHandle.c \
@@ -17,7 +16,6 @@ zmapSeqBitmap.c \
 zmapCmdLineArgs.c \
 zmapFASTA.c \
 safe-ctype.h \
-zmapConfigDir.c \
 zmapIO_P.h \
 zmapXRemoteUtils.c \
 zmapBase_I.h \
@@ -29,7 +27,6 @@ zmapReadLine_P.h \
 zmapGUImenus.c \
 zmapUrlOptions.h \
 zmapPeptide.c \
-zmapConfigDir_P.h \
 zmapUrl.c \
 safe-ctype.c \
 zmapUtils.c \