From d4bb04fe78e1f20f4059ead02103969c9239a6cf Mon Sep 17 00:00:00 2001 From: zmap <zmap> Date: Wed, 20 Jan 2010 15:56:45 +0000 Subject: [PATCH] new zmap release notes for 20 January 2010 --- .../release_notes.2010_01_20.shtml | 222 ++++++++++++++++++ 1 file changed, 222 insertions(+) create mode 100644 doc/Release_notes/release_notes.2010_01_20.shtml diff --git a/doc/Release_notes/release_notes.2010_01_20.shtml b/doc/Release_notes/release_notes.2010_01_20.shtml new file mode 100644 index 000000000..a7df5917f --- /dev/null +++ b/doc/Release_notes/release_notes.2010_01_20.shtml @@ -0,0 +1,222 @@ +<!-- File automatically generated. Do not edit. --!> + +<!--#set var="banner" value="ZMap Release Notes For '20 January 2010'" --> +<!--#include virtual="/perl/header" --> +<!--#set var="author" value="edgrif@sanger.ac.uk" --> + +<!-- The release version, etc... --!> + +<h5>Release Version: ZMap 0.1.80 </h5> + + +<h5>Release Date: 20 January 2010</h5> + + +<p> +(Last release was on 15/01/2010) +</p> + +<h5>Request Tracker Tickets Resolved</h5> +<br /> +<!-- Now the resolved tickets... --!> + +<!-- Finished getting the resolved request tracker tickets --!> + +<fieldset><legend>zmap</legend> + +<ul> +<li>Ticket No.<a href="https://rt.sanger.ac.uk/rt/Ticket/Display.html?id=152345">152345</a>, Resolved (Wed Jan 20 11:42:30 2010) +<p>doxygen docs not getting to dev. website.</p> +<p>mh17@sanger.ac.uk</p> +</li> +<li>Ticket No.<a href="https://rt.sanger.ac.uk/rt/Ticket/Display.html?id=153627">153627</a>, Resolved (Wed Jan 20 14:53:54 2010) +<p>zmap crash on 'configure colum'</p> +<p>mh17@sanger.ac.uk</p> +</li> +<li>Ticket No.<a href="https://rt.sanger.ac.uk/rt/Ticket/Display.html?id=153980">153980</a>, Resolved (Tue Jan 19 18:20:25 2010) +<p>test otterlace column hide not persistent between zooms</p> +<p>lw2@sanger.ac.uk</p> +</li> +<li>Ticket No.<a href="https://rt.sanger.ac.uk/rt/Ticket/Display.html?id=154773">154773</a>, Resolved (Tue Jan 19 14:19:35 2010) +<p>from time to time my curated objects got overlapped</p> +<p>ca1@sanger.ac.uk, vb1@sanger.ac.uk</p> +</li> +<li>Ticket No.<a href="https://rt.sanger.ac.uk/rt/Ticket/Display.html?id=155595">155595</a>, Resolved (Sun Jan 17 10:25:15 2010) +<p>Exon number display in top of Zmap - third panel</p> +<p>cas@sanger.ac.uk</p> +</li> +<li>Ticket No.<a href="https://rt.sanger.ac.uk/rt/Ticket/Display.html?id=155812">155812</a>, Resolved (Wed Jan 20 10:45:55 2010) +<p>testotterlace zmap crashes when exposing locator panel</p> +<p>lw2@sanger.ac.uk</p> +</li> +<li>Ticket No.<a href="https://rt.sanger.ac.uk/rt/Ticket/Display.html?id=155925">155925</a>, Resolved (Wed Jan 20 10:32:38 2010) +<p>unused column in feature show window</p> +<p>lw2@sanger.ac.uk</p> +</li> +<li>Ticket No.<a href="https://rt.sanger.ac.uk/rt/Ticket/Display.html?id=156034">156034</a>, Resolved (Tue Jan 19 17:18:37 2010) +<p>Empty preferences dialog when blixem executable not found</p> +<p>gb10@sanger.ac.uk</p> +</li> +<li>Ticket No.<a href="https://rt.sanger.ac.uk/rt/Ticket/Display.html?id=156117">156117</a>, Resolved (Wed Jan 20 10:55:49 2010) +<p>crashed on bumping ens_cdna</p> +<p>gdr@sanger.ac.uk</p> +</li> +</ul> + +</fieldset><br /> + +<!-- End of tickets --!> + +<fieldset> +<legend>ZMap Changes/Fixes [from cvs]</legend> + +<ul> + <li><!-- --- Start editing ZMap changes here... --- --!> + <a href="http://cvs.internal.sanger.ac.uk/cgi-bin/viewcvs.cgi/ZMap/?root=zmap">Browse CVS</a> + + </li> + <li> doc/Release_notes/release_notes.2010_01_15.shtml: new zmap + release notes for 15 January 2010 + + + </li> + <li> src/include/ZMap/zmapWebPages.h: update release notes file to + release_notes.2010_01_15.shtml + + + </li> + <li> doc/Release_notes/LAST_RELEASE_DATE.txt: update last release + notes to 15/01/2010 + + + </li> + <li> src/zmapUtils/zmapUtils_P.h: + /var/tmp/zmap.12481/ZMap/scripts/versioner run by zmap + + + </li> + <li> src/zmapWindow/zmapWindowColBump.c: reverted yesterdays non-fix + + + </li> + <li> doc/Grant/GRANT_APP.txt: sticking this here for now... + + + </li> + <li> src/zmapWindow/zmapWindowItemFactory.c: fix bug in exon number + reporting when revcompd. + + + </li> + <li> src/include/ZMap/zmapXRemote.h: hack version to match lace + version...temporary.... + + + </li> + <li> src/zmapControl/remote/zmapXRemote.c: hack version to match lace + version...temporary.... + + + </li> + <li> src/zmapView/zmapViewRemoteReceive.c: remove checking for + existing feature as temp fix... + + + </li> + <li> src/zmapWindow/: zmapWindow.c, zmapWindowDraw.c, + items/zmapWindowContainerFeatureSet.c, + items/zmapWindowContainerGroup.c, + items/zmapWindowContainerGroup.h: Fix setting of values in + multiple styles so that zooming and hidden columns work again. + + + </li> + <li> src/zmapView/zmapViewCallBlixem.c: fix my own stupid file + permissions bug. + + + </li> + <li> src/: zmapFeature/zmapFeature.c, + zmapWindow/items/zmapWindowContainerFeatureSet.c, + zmapWindow/items/zmapWindowContainerFeatureSet.h, + zmapWindow/items/zmapWindowContainerUtils.c, + zmapWindow/zmapWindowItem.c: unsorted featuresets on new feature + added to try to fix overlap bug - displayed format is now stable + from first display. Difficult to test as cannot create overlap on + demand + + + </li> + <li> src/zmapWindow/zmapWindowDrawFeatures.c: fixed indirection error + in in windowDrawContextCB + + + </li> + <li> src/: zmapControl/zmapControlPreferences.c, + zmapUtils/zmapGUINotebook.c, zmapView/zmapViewCallBlixem.c: fixed + prefernces dialog for blixem path, now runs even if not + congigured + + + </li> + <li> src/zmapWindow/zmapWindowDraw.c: use new call to set display in + feature set container. + + + </li> + <li> src/zmapWindow/items/: zmapWindowContainerFeatureSet.c, + zmapWindowContainerFeatureSet.h: add new version of display mode + setting code to fix bugs. + + + </li> + <li> src/zmapWindow/zmapWindowColConfig.c: fix up a few bugs in + interactions between col dialog and menu hide. + + + </li> + <li> src/zmapWindow/items/zmapWindowContainerFeatureSet.c: Silly + uninitialized variable bug. Better now + + + </li> + <li> src/zmapWindow/: zmapWindowColBump.c, zmapWindowMenus.c, + zmapWindow_P.h: made unbump all columns work as exepcted + + <!-- --- End editing ZMap changes here... --- --!> + </li> +</ul> +</fieldset> +<br /> +<fieldset> +<legend>Aceb Changes/Fixes [from cvs]</legend> +<ul> + <li><!-- --- Start editing ACeDB changes here... --- --!> + <a href="http://cvs.internal.sanger.ac.uk/cgi-bin/viewcvs.cgi/acedb/?root=acedb">Browse CVS</a> + + </li> + <li> w9/blxFetch.c: Fixed a memory bug that was causing readConfigFile + to fail on 64 bit machines + + + </li> + <li> w9/blxview.c: Added extra debug for the error in calcID where + requested coords are out of range + + + </li> + <li> w7/smapconvert.c: add debug stuff to converthomol(). + + + </li> + <li> w6/smap.c: fix stupid bug in sMapComposeMaps...got strand wrong + for 1 base pair align blocks. + + <!-- --- End editing ACeDB changes here... --- --!> + </li> +</ul> +</fieldset> +<br /> + +<!--#include virtual="/perl/footer" --> + -- GitLab