Fix focus entity on GB being stored in web browser history (#446)

src/ensembl/src/content/app/browser/Browser.tsx

@@ -161,7 +161,9 @@ export const ExampleObjectLinks = (props: BrowserProps) => {
 
     return (
       <div key={exampleObject.object_id} className={styles.exampleLink}>
-        <Link to={path}>Example {exampleObject.type}</Link>
+        <Link to={path} replace>
+          Example {exampleObject.type}
+        </Link>
       </div>
     );
   });

src/ensembl/src/content/app/browser/drawer/drawer-views/gene-summary/GeneSummary.tsx

@@ -144,7 +144,7 @@ const GeneSummary = () => {
 
       <div className={`${styles.row} ${styles.spaceAbove}`}>
         <div className={styles.value}>
-          <ViewInApp links={{ entityViewer: entityViewerUrl }} />
+          <ViewInApp links={{ entityViewer: { url: entityViewerUrl } }} />
         </div>
       </div>
     </div>

src/ensembl/src/content/app/browser/drawer/drawer-views/transcript-summary/TranscriptSummary.tsx

@@ -328,7 +328,7 @@ const TranscriptSummary = () => {
         <div className={styles.value}>
           <ViewInApp
             classNames={{ label: styles.lightText }}
-            links={{ entityViewer: entityViewerUrl }}
+            links={{ entityViewer: { url: entityViewerUrl } }}
           />
         </div>
       </div>

src/ensembl/src/content/app/browser/track-panel/track-panel-modal/modal-views/TrackPanelBookmarks.scss

@@ -20,7 +20,7 @@
   font-weight: 300;
 }
 
-.title{
+.title {
   font-size: 14px;
   margin: 5px 0 10px 10px;
   font-weight: $bold;

src/ensembl/src/content/app/browser/track-panel/track-panel-modal/modal-views/TrackPanelBookmarks.test.tsx

@@ -15,148 +15,250 @@
  */
 
 import React from 'react';
+import { Provider } from 'react-redux';
+import thunk from 'redux-thunk';
+import configureMockStore from 'redux-mock-store';
 import { render, screen } from '@testing-library/react';
 import userEvent from '@testing-library/user-event';
 import faker from 'faker';
 import times from 'lodash/times';
+import set from 'lodash/fp/set';
 
-import { createEnsObject } from 'tests/fixtures/ens-object';
 import { TrackPanelBookmarks } from './TrackPanelBookmarks';
 
+import { DrawerView } from 'src/content/app/browser/drawer/drawerState';
 import { PreviouslyViewedObject } from '../../trackPanelState';
+import * as trackPanelActions from '../../trackPanelActions';
 
 jest.mock('react-router-dom', () => ({
   Link: (props: any) => (
-    <div {...props} className={'link'}>
+    <a href={props.to} onClick={props.onClick}>
       {props.children}
-    </div>
+    </a>
   )
 }));
 
-const createPreviouslyViewedLink = (): PreviouslyViewedObject => ({
+const genomeId = 'triticum_aestivum_GCA_900519105_1';
+const geneId = 'TraesCS3D02G273600';
+const region = '3D:2585940-2634711';
+const geneObjectId = `${genomeId}:gene:${geneId}`;
+const regionObjectId = `${genomeId}:region:${region}`;
+
+const createRandomPreviouslyViewedObject = (): PreviouslyViewedObject => ({
   genome_id: faker.random.word(),
   object_id: `${faker.random.word()}:gene:${faker.random.uuid()}`,
   object_type: 'gene',
   label: faker.random.word()
 });
 
-const closeTrackPanelModal = jest.fn();
-const updateTrackStatesAndSave = jest.fn();
-const fetchExampleEnsObjects = jest.fn();
-const changeDrawerViewAndOpen = jest.fn();
+const previouslyViewedObjects = [
+  {
+    genome_id: genomeId,
+    object_id: geneObjectId,
+    object_type: 'gene',
+    label: geneId
+  },
+  {
+    genome_id: genomeId,
+    object_id: regionObjectId,
+    object_type: 'region',
+    label: region
+  }
+];
 
-describe('<TrackPanelBookmarks />', () => {
-  const numberOfExampleObjects = faker.random.number({ min: 5, max: 10 });
-  const numberOfPreviouslyViewedObjects = faker.random.number({
-    min: 5,
-    max: 20
-  });
+const example_objects = [
+  {
+    id: geneId,
+    type: 'gene'
+  },
+  {
+    id: region,
+    type: 'region'
+  }
+];
+
+const mockState = {
+  browser: {
+    browserEntity: {
+      activeGenomeId: genomeId,
+      activeEnsObjectIds: {
+        [genomeId]: geneObjectId
+      }
+    },
+    trackPanel: {
+      [genomeId]: {
+        isTrackPanelModalOpened: true,
+        trackPanelModalView: '',
+        previouslyViewedObjects
+      }
+    }
+  },
+  drawer: {
+    isDrawerOpened: { [genomeId]: false },
+    drawerView: { [genomeId]: DrawerView.BOOKMARKS },
+    activeDrawerTrackIds: {}
+  },
+  ensObjects: {
+    [geneObjectId]: {
+      data: {
+        description: 'Heat shock protein 101',
+        genome_id: genomeId,
+        label: geneId,
+        location: {
+          chromosome: '3D',
+          end: 379539827,
+          start: 379535906
+        },
+        stable_id: geneId,
+        type: 'gene',
+        object_id: geneObjectId
+      }
+    },
+    [regionObjectId]: {
+      data: {
+        genome_id: genomeId,
+        label: region,
+        location: {
+          chromosome: '3D',
+          start: 2585940,
+          end: 2634711
+        },
+        type: 'region',
+        object_id: regionObjectId
+      }
+    }
+  },
+  genome: {
+    genomeInfo: {
+      genomeInfoData: {
+        [genomeId]: {
+          example_objects,
+          genome_id: genomeId
+        }
+      }
+    }
+  }
+};
+
+const mockStore = configureMockStore([thunk]);
+let store: ReturnType<typeof mockStore>;
 
-  const props = {
-    activeGenomeId: faker.random.word(),
-    exampleEnsObjects: times(numberOfExampleObjects, () => createEnsObject()),
-    previouslyViewedObjects: times(numberOfPreviouslyViewedObjects, () =>
-      createPreviouslyViewedLink()
-    ),
-    fetchExampleEnsObjects,
-    updateTrackStatesAndSave,
-    closeTrackPanelModal,
-    changeDrawerViewAndOpen
-  };
+const wrapInRedux = (state: typeof mockState = mockState) => {
+  store = mockStore(state);
 
+  return render(
+    <Provider store={store}>
+      <TrackPanelBookmarks />
+    </Provider>
+  );
+};
+
+describe('<TrackPanelBookmarks />', () => {
   beforeEach(() => {
     jest.resetAllMocks();
   });
 
+  it('renders example links', () => {
+    wrapInRedux();
+    const exampleGeneLink = screen.getByText('Example gene') as HTMLElement;
+    const exampleRegionLink = screen.getByText('Example region') as HTMLElement;
+
+    const expectedGeneHref = `/genome-browser/${genomeId}?focus=gene:${geneId}`;
+    const expectedRegionHref = `/genome-browser/${genomeId}?focus=region:${region}`;
+
+    expect(exampleGeneLink.getAttribute('href')).toBe(expectedGeneHref);
+    expect(exampleRegionLink.getAttribute('href')).toBe(expectedRegionHref);
+  });
+
   it('renders previously viewed links', () => {
-    const { container } = render(<TrackPanelBookmarks {...props} />);
-    const links = [...container.querySelectorAll('.link')] as HTMLElement[];
-    const linkTexts = props.previouslyViewedObjects.map(({ label }) => label);
+    wrapInRedux();
+    const geneLink = screen.getByText(geneId) as HTMLElement;
+    const regionLink = screen.getByText(region) as HTMLElement;
 
-    expect(
-      linkTexts.every((text) =>
-        links.find((link) => {
-          return link.innerHTML === text;
-        })
-      )
-    ).toBe(true);
+    const expectedGeneHref = `/genome-browser/${genomeId}?focus=gene:${geneId}`;
+    const expectedRegionHref = `/genome-browser/${genomeId}?focus=region:${region}`;
+
+    expect(geneLink.getAttribute('href')).toBe(expectedGeneHref);
+    expect(regionLink.getAttribute('href')).toBe(expectedRegionHref);
   });
 
   it('closes the bookmarks modal when a bookmark link is clicked', () => {
-    render(<TrackPanelBookmarks {...props} />);
-    const previouslyViewedLinksContainer = screen.getByTestId(
-      'previously viewed links'
-    );
-    const firstLink = (previouslyViewedLinksContainer as HTMLElement).querySelector(
-      '.link'
-    );
+    jest.spyOn(trackPanelActions, 'closeTrackPanelModal');
+    const { container } = wrapInRedux();
+    const firstLink = container.querySelector('a');
 
     userEvent.click(firstLink as HTMLElement);
-    expect(closeTrackPanelModal).toBeCalled();
+
+    expect(trackPanelActions.closeTrackPanelModal).toHaveBeenCalled();
+
+    (trackPanelActions.closeTrackPanelModal as any).mockRestore();
   });
 
-  it('shows the ellipsis only when the total objects is more than 20', () => {
-    const previouslyViewedObjects = times(20, () =>
-      createPreviouslyViewedLink()
-    );
-    const { rerender } = render(
-      <TrackPanelBookmarks
-        {...props}
-        previouslyViewedObjects={previouslyViewedObjects}
-      />
+  it('shows the ellipsis only when there are more than 20 objects', () => {
+    let wrapper = wrapInRedux(
+      set(
+        `browser.trackPanel.${genomeId}.previouslyViewedObjects`,
+        times(20, () => createRandomPreviouslyViewedObject()),
+        mockState
+      )
     );
-    const previouslyViewedSection = screen.getByText('Previously viewed');
-
-    expect(previouslyViewedSection.querySelector('button')).toBeFalsy();
+    expect(
+      wrapper.container.querySelector(
+        '.trackPanelBookmarks .sectionTitle button'
+      )
+    ).toBeFalsy();
 
-    // Add another link to make it 21 links
-    previouslyViewedObjects.push(createPreviouslyViewedLink());
-    rerender(
-      <TrackPanelBookmarks
-        {...props}
-        previouslyViewedObjects={previouslyViewedObjects}
-      />
+    // Add 21 links to see if ellipsis is shown
+    wrapper = wrapInRedux(
+      set(
+        `browser.trackPanel.${genomeId}.previouslyViewedObjects`,
+        times(21, () => createRandomPreviouslyViewedObject()),
+        mockState
+      )
     );
 
-    expect(previouslyViewedSection.querySelector('button')).toBeTruthy();
+    expect(
+      wrapper.container.querySelector(
+        '.trackPanelBookmarks .sectionTitle button'
+      )
+    ).toBeTruthy();
   });
 
-  it('calls changeDrawerViewAndOpen when the ellipsis is clicked', () => {
-    const previouslyViewedObjects = times(21, () =>
-      createPreviouslyViewedLink()
-    );
-    render(
-      <TrackPanelBookmarks
-        {...props}
-        previouslyViewedObjects={previouslyViewedObjects}
-      />
+  it('changes drawer view and toggles drawer when the ellipsis is clicked', () => {
+    const { container } = wrapInRedux(
+      set(
+        `browser.trackPanel.${genomeId}.previouslyViewedObjects`,
+        times(21, () => createRandomPreviouslyViewedObject()),
+        mockState
+      )
     );
-    const previouslyViewedSection = screen.getByText('Previously viewed');
-    const ellipsisButton = previouslyViewedSection.querySelector(
-      'button'
+
+    const ellipsisButton = container.querySelector(
+      '.sectionTitle button'
     ) as HTMLElement;
 
     userEvent.click(ellipsisButton);
 
-    expect(changeDrawerViewAndOpen).toBeCalled();
-  });
+    const dispatchedDrawerActions = store.getActions();
 
-  it('renders correct number of links to example objects', () => {
-    render(<TrackPanelBookmarks {...props} />);
-    const exampleLinksWrapper = screen.getByTestId('example links');
+    const updateDrawerViewAction = dispatchedDrawerActions.find(
+      (action) => action.type === 'drawer/update-drawer-view'
+    );
+    const toggleDrawerAction = dispatchedDrawerActions.find(
+      (action) => action.type === 'drawer/toggle-drawer'
+    );
 
-    expect(exampleLinksWrapper?.querySelectorAll('.link').length).toBe(
-      numberOfExampleObjects
+    expect(updateDrawerViewAction.payload[genomeId]).toEqual(
+      DrawerView.BOOKMARKS
     );
+    expect(toggleDrawerAction.payload[genomeId]).toEqual(true);
   });
 
-  it('calls closeTrackPanelModal when an example object link is clicked', () => {
-    render(<TrackPanelBookmarks {...props} />);
-    const exampleLinksWrapper = screen.getByTestId('example links');
-    const exampleLink = exampleLinksWrapper?.querySelector('.link');
-
-    userEvent.click(exampleLink as HTMLElement);
+  it('renders correct number of links to example objects', () => {
+    const { container } = wrapInRedux();
 
-    expect(closeTrackPanelModal).toBeCalled();
+    expect(container.querySelectorAll('.exampleLinks a').length).toBe(
+      example_objects.length
+    );
   });
 });

src/ensembl/src/content/app/browser/track-panel/track-panel-modal/modal-views/TrackPanelBookmarks.tsx

@@ -15,58 +15,47 @@
  */
 
 import React from 'react';
-import { Link } from 'react-router-dom';
-import { connect } from 'react-redux';
+import { useSelector, useDispatch } from 'react-redux';
 import upperFirst from 'lodash/upperFirst';
+import { Link } from 'react-router-dom';
 
 import analyticsTracking from 'src/services/analytics-service';
 import * as urlFor from 'src/shared/helpers/urlHelper';
 import { buildFocusIdForUrl } from 'src/shared/state/ens-object/ensObjectHelpers';
+
 import { getBrowserActiveGenomeId } from 'src/content/app/browser/browserSelectors';
 import { getActiveGenomePreviouslyViewedObjects } from 'src/content/app/browser/track-panel/trackPanelSelectors';
 import { getExampleEnsObjects } from 'src/shared/state/ens-object/ensObjectSelectors';
 import { closeTrackPanelModal } from '../../trackPanelActions';
-import { updateTrackStatesAndSave } from 'src/content/app/browser/browserActions';
 import { changeDrawerViewAndOpen } from 'src/content/app/browser/drawer/drawerActions';
 
 import ImageButton from 'src/shared/components/image-button/ImageButton';
 import { ReactComponent as EllipsisIcon } from 'static/img/track-panel/ellipsis.svg';
 
-import { RootState } from 'src/store';
-import { EnsObject } from 'src/shared/state/ens-object/ensObjectTypes';
 import { Status } from 'src/shared/types/status';
-import { PreviouslyViewedObject } from 'src/content/app/browser/track-panel/trackPanelState';
-import { BrowserTrackStates } from 'src/content/app/browser/track-panel/trackPanelConfig';
 
 import styles from './TrackPanelBookmarks.scss';
 import { DrawerView } from 'src/content/app/browser/drawer/drawerState';
 
-export type TrackPanelBookmarksProps = {
-  activeGenomeId: string | null;
-  exampleEnsObjects: EnsObject[];
-  previouslyViewedObjects: PreviouslyViewedObject[];
-  updateTrackStatesAndSave: (trackStates: BrowserTrackStates) => void;
-  closeTrackPanelModal: () => void;
-  changeDrawerViewAndOpen: (drawerView: DrawerView) => void;
-};
+export const ExampleLinks = () => {
+  const exampleEnsObjects = useSelector(getExampleEnsObjects);
+  const activeGenomeId = useSelector(getBrowserActiveGenomeId);
+  const dispatch = useDispatch();
+
+  const onLinkClick = () => dispatch(closeTrackPanelModal());
 
-type ExampleLinksProps = Pick<
-  TrackPanelBookmarksProps,
-  'exampleEnsObjects' | 'activeGenomeId' | 'closeTrackPanelModal'
->;
-export const ExampleLinks = (props: ExampleLinksProps) => {
   return (
-    <div data-test-id="example links">
+    <div data-test-id="example links" className="exampleLinks">
       <div className={styles.sectionTitle}>Example links</div>
-      {props.exampleEnsObjects.map((exampleObject) => {
+      {exampleEnsObjects.map((exampleObject) => {
         const path = urlFor.browser({
-          genomeId: props.activeGenomeId,
+          genomeId: activeGenomeId,
           focus: buildFocusIdForUrl(exampleObject.object_id)
         });
 
         return (
           <div key={exampleObject.object_id} className={styles.linkHolder}>
-            <Link to={path} onClick={props.closeTrackPanelModal}>
+            <Link to={path} onClick={onLinkClick} replace>
               Example {exampleObject.type}
             </Link>
           </div>
@@ -76,14 +65,12 @@ export const ExampleLinks = (props: ExampleLinksProps) => {
   );
 };
 
-type PreviouslyViewedLinksProps = Pick<
-  TrackPanelBookmarksProps,
-  | 'previouslyViewedObjects'
-  | 'updateTrackStatesAndSave'
-  | 'closeTrackPanelModal'
->;
+export const PreviouslyViewedLinks = () => {
+  const previouslyViewedObjects = useSelector(
+    getActiveGenomePreviouslyViewedObjects
+  );
+  const dispatch = useDispatch();
 
-export const PreviouslyViewedLinks = (props: PreviouslyViewedLinksProps) => {
   const onLinkClick = (objectType: string, index: number) => {
     analyticsTracking.trackEvent({
       category: 'recent_bookmark_link',
@@ -92,12 +79,12 @@ export const PreviouslyViewedLinks = (props: PreviouslyViewedLinksProps) => {
       value: index + 1
     });
 
-    props.closeTrackPanelModal();
+    dispatch(closeTrackPanelModal());
   };
 
   return (
     <div data-test-id="previously viewed links">
-      {[...props.previouslyViewedObjects]
+      {[...previouslyViewedObjects]
         .reverse()
         .map((previouslyViewedObject, index) => {
           const path = urlFor.browser({
@@ -111,6 +98,7 @@ export const PreviouslyViewedLinks = (props: PreviouslyViewedLinksProps) => {
               className={styles.linkHolder}
             >
               <Link
+                replace
                 to={path}
                 onClick={() =>
                   onLinkClick(previouslyViewedObject.object_type, index)
@@ -128,14 +116,12 @@ export const PreviouslyViewedLinks = (props: PreviouslyViewedLinksProps) => {
   );
 };
 
-export const TrackPanelBookmarks = (props: TrackPanelBookmarksProps) => {
-  const {
-    previouslyViewedObjects,
-    exampleEnsObjects,
-    activeGenomeId,
-    updateTrackStatesAndSave,
-    closeTrackPanelModal
-  } = props;
+export const TrackPanelBookmarks = () => {
+  const previouslyViewedObjects = useSelector(
+    getActiveGenomePreviouslyViewedObjects
+  );
+  const exampleEnsObjects = useSelector(getExampleEnsObjects);
+  const dispatch = useDispatch();
 
   const limitedPreviouslyViewedObjects = previouslyViewedObjects.slice(-20);
 
@@ -147,26 +133,18 @@ export const TrackPanelBookmarks = (props: TrackPanelBookmarksProps) => {
       value: previouslyViewedObjects.length
     });
 
-    props.changeDrawerViewAndOpen(DrawerView.BOOKMARKS);
+    dispatch(changeDrawerViewAndOpen(DrawerView.BOOKMARKS));
   };
 
   return (
     <section className="trackPanelBookmarks">
       <div className={styles.title}>Bookmarks</div>
-      {exampleEnsObjects.length ? (
-        <>
-          <ExampleLinks
-            exampleEnsObjects={exampleEnsObjects}
-            activeGenomeId={activeGenomeId}
-            closeTrackPanelModal={closeTrackPanelModal}
-          />
-        </>
-      ) : null}
+      {exampleEnsObjects.length ? <ExampleLinks /> : null}
       {limitedPreviouslyViewedObjects.length ? (
         <>
-          <div className={styles.sectionTitle}>
+          <div data-test-id="previously viewed" className={styles.sectionTitle}>
             Previously viewed
-            {props.previouslyViewedObjects.length > 20 && (
+            {previouslyViewedObjects.length > 20 && (