GitLab

- /api/ensembl_object namespace has changed to /api/object
- /api/object/info parses region location and generates data for region focus object
- ensembl_object_id field in the response has been renamed to object_id
- /api/genome_search endpoint now accepts the exclude parameter
   (to exclude already selected genome id from search results)
    and the limit parameter (to limit the number of search matches in the response)
- show gene coordinates in BrowserBar
- extract formatter of genetic location into its own functino

* make drawer state unique to species instance

* fix drawer not closing when clicked on browser tab and browser image

* make selectors return the genome specific values for drawer and some browser specific state properties

* fix thunk type in drawer actions

* refactor drawer state returned in reducer

* fix wrong drawer open check in 4b8ec1b5

* make more changes as suggested in code review

* fix wrong thunk dispatch type in track panel actions

* fix wrong value returned for selectedBrowserTab

* remove unnecessary calc method

* fix wrong value returned for selectedBrowserTab

* fix correct track not being highlighted on selection

* fix undefined returned by drawer selector

* change drawerViewForGenome to drawerView to be more relevant

* use calc for getting the browser width rather than 41px (needs to be in the same format as other width values)

* fix broken test cases

* add a comment that tells about the need for the calc format for browser animation

* use the ChrLocations replacing the genome ChrLocation object type

* use classname to append class names instead of manually doing it

* create closeDrawer action as it is used in many places within the browser

* batch multiple dispatches in drawer actions

* fix key type of TrackItemColour enum

- use postMessage api instead of dispatching custom events on canvas wrapper element
- add actualChrLocation field to browser location state
  (shows where the browser is at any given moment)
- add message counter that keeps track of the sequence of messages
  exchanged between GenomeBrowser and BrowserChrome.
- move code for updating GenomeBrowser page url from Browser component to browserActions
- update .gitignore rules regarding .vscode folder

- Use redux to keep tracks state
- Pass non-default track status to genome browser
   if a track list item has a non-default — which currently means, inactive —
   status upon mounting of the TrackListItem component, send an event
   to genome browser to show/hide the track accordingly

* Fix BrowserBar info

* Create type BrowserChrLocation

* Fix tests

* Get gene description from the API response

* Reorder CICD pipelines

* PR review changes

* Handle empty descriptions

A giant chunk of code pull request containing updates to genome browser and browser chrome
to enable browsing genomes of multiple species.

* Track panel animation

* Update browser content styling

* Fix the drawer position

* TrackPanel animation settings update

* Apply easing animation to TrackConfig

* Remove ypos prop

* Remove the horizontal scroll bar

* Fix drawer animation

* Css position error fix

* Fix the drawer opening animation issue

* PR review fixes

- Add ErrorBoundary component
- Add error-service
- Add fallback screens to show on error

General:
-  Update configuration files for running tests properly (tsconfig and webpack)

Fix tests for the following components:
-  Content
- Root
-  Launchbar
- BrowserNavIcon
- BrowserNavBar
- Header (note: deleted a couple of tests)
- HeaderButtons (note: skip test for calling the toggleAccount function; unsure about current behaviour of the component)
- BrowserBar
- App

Delete useless tests:

- Browser (remove snapshot test; will try to come up with more useful tests)
- BrowserImage (current tests don’t do anything useful; proper testing will be difficult, because this component extensively uses custom events)
- LaunchbarContainer
- LaunchbarIcon (they were copy-pasted tests for LaunchbarContainer anyway)
- browserActions and headerActions (tests were essentially testing the library we use to generate actions; and we shouldn't be testing third-party libraries)
- headerReducer and browserReducer (reducers are very simple and hardly need testing)
- browserSelectors and headerSelectors (test are very simple and testing things that Typescript will report anyway)

- Slice the browser reducer into smaller reducers
- Separate reducers, actions et al into their own files for better maintenance
- Add api-service that contains the code for data fetching

* Add google analytics to track all the pageviews, navigations and events

- Using custom middleware and react-ga track the events
- A warning is displayed in the console if the google analytics meta data is not defined when a new event is created

* Minor correction to the warning message displayed on the console for missing GA metadata

* Check if action value is passed in along with the GA metadata and use it

* Update ReactGA package version to be exact value

* Revert the intentional typo in the browser actions

* Remove the automatic enforcement of the GA meta data

- Added the ADR for Google Analytics

* Add service wrapper to ReactGA and implement connected react router

* Add the missing files from my previous commit.

- Added the missing Analytics service wrapper
- Added the ADR for google analytics tracking

* Renamed the service file

* Importing LOCATION_CHANGE from connected-react-router

* Remove the unwanted return statement form the store

* Ignoring the history replace actions from getting passed to analytics

- History replace actions are not considered to be page views.
- Update the :location in the browser URL to be a query string '?region=:location'

* Remove '*' from the Browser path URL as it is not required

* Update the check involved in tracking the page views

- Checkking if the path is changed before sending the tracking info

* Add type to GA service class

* Remove trailing slash from the url before the query string

* Removed an unnecessary comment

* Get the tacking code for GA form the env

This reverts commit 7fa4a581.

Who knew cusotm events sometimes appear without stack unwinding!?

Needs robust track naming into react components, then events can be sent.

"Positioning bugfix for massively over-range updates."
Will be more careful and then recommit.

This reverts commit 8922a8eb.

refactor browser component events and add support to notify browser when chr location changed in site framework

add default species and gene for browser to URL and downgrade BrowserImage to a non-connected component