From dc85a0bc23160bb8e4c8b9430d4d50d02556af3b Mon Sep 17 00:00:00 2001
From: Andrey Azov <andrey@ebi.ac.uk>
Date: Thu, 6 Aug 2020 23:22:42 +0100
Subject: [PATCH] Refactor prototype to something close to an MVP (#1)
- translate js to typescript
- add the sequelize ORM for more convenience when interacting with the sqlite database
- enable hierarchical folder structure for storing documents
- remove eleventy
---
.eleventy.js | 54 -
.gitlab-ci.yml | 10 +-
Dockerfile | 15 +-
api/article.js | 49 -
api/diagnostics.js | 13 -
api/search.js | 55 -
build.js | 7 -
config.js | 19 -
config.ts | 32 +
decisions/entities.md | 24 +
decisions/questions.md | 7 +
decisions/todo.md | 54 +
docs/article/ensembl-select.md | 33 -
docs/article/getting-started.md | 7 -
docs/article/viewing-ensembl-data.md | 8 -
.../getting-started/about-the-site.md | 5 +
docs/ensembl-help/getting-started/faq.md | 5 +
docs/ensembl-help/getting-started/index.yml | 16 +
.../media}/american-red-squirrel.jpg | Bin
docs/ensembl-help/getting-started/search.md | 7 +
.../getting-started/selecting-a-species.md} | 14 +-
docs/ensembl-help/getting-started/toc.yml | 10 +
.../getting-started/videos/genome-browser.yml | 3 +
.../getting-started/videos/mane-select.yml | 3 +
.../videos/select-a-species.yml | 6 +
.../getting-started/what-is-ensembl.md | 5 +
docs/ensembl-help/toc.yml | 14 +
.../using-ensembl/citing-ensembl.md} | 2 +-
.../using-ensembl/exporting-images.md | 5 +
.../using-ensembl/external-references.md | 5 +
docs/ensembl-help/using-ensembl/glossary.md | 5 +
.../using-ensembl/local-mirror.md | 5 +
docs/ensembl-help/using-ensembl/roadmap.md | 5 +
docs/ensembl-help/using-ensembl/sharing.md | 5 +
docs/ensembl-help/using-ensembl/toc.yml | 22 +
.../genome-browser/custom-tracks.md | 5 +
.../genome-browser/toc.yml | 4 +
.../using-the-genome-browser.md | 0
.../viewing-ensembl-data/toc.yml | 14 +
docs/video/genome-browser.md | 10 -
docs/video/mane-select.md | 11 -
docs/video/select-a-species.md | 8 -
eleventy-site/_data/articles.js | 21 -
eleventy-site/_includes/layouts/default.njk | 12 -
eleventy-site/articles.njk | 25 -
eleventy-site/css/styles.css | 19 -
eleventy-site/index.njk | 19 -
k8s/deployment.yaml | 8 +-
k8s/service-node.yaml | 6 +-
package-lock.json | 5797 ++++++-----------
package.json | 58 +-
scripts/build-database/addArticles.js | 44 -
scripts/build-database/addTags.js | 53 -
scripts/build-database/addVideos.js | 20 -
scripts/build-database/createDatabase.js | 45 -
scripts/build-database/index.js | 18 -
scripts/build-database/markdownImagePlugin.js | 19 -
scripts/build-database/parseMarkdown.js | 34 -
scripts/build-database/readSourceFiles.js | 29 -
scripts/build-index/indexArticles.js | 16 -
scripts/build-index/parseFile.js | 30 -
scripts/build-index/readSourceFiles.js | 27 -
scripts/build-index/saveArticlesIndex.js | 12 -
scripts/get-from-database/getArticle.js | 25 -
scripts/get-from-database/getVideo.js | 15 -
scripts/getFromDatabase.js | 17 -
scripts/searchIndex.js | 9 -
server/app.js | 13 -
server/server.js | 5 -
.../build-database/addArticles.ts | 109 +
src/build-scripts/build-database/addMenus.ts | 14 +
.../build-database/buildMenus.ts | 52 +
src/build-scripts/build-database/index.ts | 23 +
.../build-database/markdownImagePlugin.ts | 27 +
.../build-database/parseMarkdown.ts | 38 +
.../build-database/readSourceFiles.ts | 51 +
.../build-scripts/build-index/index.ts | 8 +-
.../build-index/indexArticles.ts | 22 +
.../build-index/parseMarkdown.ts | 33 +
.../build-index/readSourceFiles.ts | 36 +
.../build-index/saveArticlesIndex.ts | 13 +
src/build-scripts/copy-assets/index.ts | 28 +
src/build-scripts/filePathHelpers.ts | 45 +
src/build-scripts/index.ts | 23 +
src/controllers/articlesController.ts | 58 +
src/controllers/collectionsController.ts | 27 +
src/controllers/healthcheckController.ts | 7 +
src/controllers/menusController.ts | 37 +
src/controllers/searchController.ts | 42 +
src/db/prepareDatabase.ts | 10 +
src/db/sequelize.ts | 20 +
src/models/Article.ts | 93 +
src/models/Collection.ts | 42 +
src/models/Menu.ts | 33 +
src/models/Video.ts | 48 +
src/models/index.ts | 4 +
src/server/app.ts | 24 +
src/server/index.ts | 7 +
src/types/ParsedArticle.ts | 13 +
src/types/ParsedMenu.ts | 7 +
src/types/ParsedVideo.ts | 6 +
src/types/Relation.ts | 16 +
tsconfig.json | 27 +
103 files changed, 3235 insertions(+), 4785 deletions(-)
delete mode 100644 .eleventy.js
delete mode 100644 api/article.js
delete mode 100644 api/diagnostics.js
delete mode 100644 api/search.js
delete mode 100644 build.js
delete mode 100644 config.js
create mode 100644 config.ts
create mode 100644 decisions/entities.md
create mode 100644 decisions/questions.md
create mode 100644 decisions/todo.md
delete mode 100644 docs/article/ensembl-select.md
delete mode 100644 docs/article/getting-started.md
delete mode 100644 docs/article/viewing-ensembl-data.md
create mode 100644 docs/ensembl-help/getting-started/about-the-site.md
create mode 100644 docs/ensembl-help/getting-started/faq.md
create mode 100644 docs/ensembl-help/getting-started/index.yml
rename {images/foo => docs/ensembl-help/getting-started/media}/american-red-squirrel.jpg (100%)
create mode 100644 docs/ensembl-help/getting-started/search.md
rename docs/{article/select-a-species.md => ensembl-help/getting-started/selecting-a-species.md} (58%)
create mode 100644 docs/ensembl-help/getting-started/toc.yml
create mode 100644 docs/ensembl-help/getting-started/videos/genome-browser.yml
create mode 100644 docs/ensembl-help/getting-started/videos/mane-select.yml
create mode 100644 docs/ensembl-help/getting-started/videos/select-a-species.yml
create mode 100644 docs/ensembl-help/getting-started/what-is-ensembl.md
create mode 100644 docs/ensembl-help/toc.yml
rename docs/{article/using-ensembl.md => ensembl-help/using-ensembl/citing-ensembl.md} (97%)
create mode 100644 docs/ensembl-help/using-ensembl/exporting-images.md
create mode 100644 docs/ensembl-help/using-ensembl/external-references.md
create mode 100644 docs/ensembl-help/using-ensembl/glossary.md
create mode 100644 docs/ensembl-help/using-ensembl/local-mirror.md
create mode 100644 docs/ensembl-help/using-ensembl/roadmap.md
create mode 100644 docs/ensembl-help/using-ensembl/sharing.md
create mode 100644 docs/ensembl-help/using-ensembl/toc.yml
create mode 100644 docs/ensembl-help/using-ensembl/viewing-ensembl-data/genome-browser/custom-tracks.md
create mode 100644 docs/ensembl-help/using-ensembl/viewing-ensembl-data/genome-browser/toc.yml
rename docs/{article => ensembl-help/using-ensembl/viewing-ensembl-data/genome-browser}/using-the-genome-browser.md (100%)
create mode 100644 docs/ensembl-help/using-ensembl/viewing-ensembl-data/toc.yml
delete mode 100644 docs/video/genome-browser.md
delete mode 100644 docs/video/mane-select.md
delete mode 100644 docs/video/select-a-species.md
delete mode 100644 eleventy-site/_data/articles.js
delete mode 100644 eleventy-site/_includes/layouts/default.njk
delete mode 100644 eleventy-site/articles.njk
delete mode 100644 eleventy-site/css/styles.css
delete mode 100644 eleventy-site/index.njk
delete mode 100644 scripts/build-database/addArticles.js
delete mode 100644 scripts/build-database/addTags.js
delete mode 100644 scripts/build-database/addVideos.js
delete mode 100644 scripts/build-database/createDatabase.js
delete mode 100644 scripts/build-database/index.js
delete mode 100644 scripts/build-database/markdownImagePlugin.js
delete mode 100644 scripts/build-database/parseMarkdown.js
delete mode 100644 scripts/build-database/readSourceFiles.js
delete mode 100644 scripts/build-index/indexArticles.js
delete mode 100644 scripts/build-index/parseFile.js
delete mode 100644 scripts/build-index/readSourceFiles.js
delete mode 100644 scripts/build-index/saveArticlesIndex.js
delete mode 100644 scripts/get-from-database/getArticle.js
delete mode 100644 scripts/get-from-database/getVideo.js
delete mode 100644 scripts/getFromDatabase.js
delete mode 100644 scripts/searchIndex.js
delete mode 100644 server/app.js
delete mode 100644 server/server.js
create mode 100644 src/build-scripts/build-database/addArticles.ts
create mode 100644 src/build-scripts/build-database/addMenus.ts
create mode 100644 src/build-scripts/build-database/buildMenus.ts
create mode 100644 src/build-scripts/build-database/index.ts
create mode 100644 src/build-scripts/build-database/markdownImagePlugin.ts
create mode 100644 src/build-scripts/build-database/parseMarkdown.ts
create mode 100644 src/build-scripts/build-database/readSourceFiles.ts
rename scripts/build-index/index.js => src/build-scripts/build-index/index.ts (64%)
create mode 100644 src/build-scripts/build-index/indexArticles.ts
create mode 100644 src/build-scripts/build-index/parseMarkdown.ts
create mode 100644 src/build-scripts/build-index/readSourceFiles.ts
create mode 100644 src/build-scripts/build-index/saveArticlesIndex.ts
create mode 100644 src/build-scripts/copy-assets/index.ts
create mode 100644 src/build-scripts/filePathHelpers.ts
create mode 100644 src/build-scripts/index.ts
create mode 100644 src/controllers/articlesController.ts
create mode 100644 src/controllers/collectionsController.ts
create mode 100644 src/controllers/healthcheckController.ts
create mode 100644 src/controllers/menusController.ts
create mode 100644 src/controllers/searchController.ts
create mode 100644 src/db/prepareDatabase.ts
create mode 100644 src/db/sequelize.ts
create mode 100644 src/models/Article.ts
create mode 100644 src/models/Collection.ts
create mode 100644 src/models/Menu.ts
create mode 100644 src/models/Video.ts
create mode 100644 src/models/index.ts
create mode 100644 src/server/app.ts
create mode 100644 src/server/index.ts
create mode 100644 src/types/ParsedArticle.ts
create mode 100644 src/types/ParsedMenu.ts
create mode 100644 src/types/ParsedVideo.ts
create mode 100644 src/types/Relation.ts
create mode 100644 tsconfig.json
diff --git a/.eleventy.js b/.eleventy.js
deleted file mode 100644
index 9089d2f..0000000
--- a/.eleventy.js
+++ /dev/null
@@ -1,54 +0,0 @@
-const util = require('util');
-
-module.exports = function(config) {
- config.addLayoutAlias('default', 'layouts/default.njk');
- config.addLayoutAlias('with_video', 'layouts/with_video.njk');
-
- config.addPassthroughCopy('eleventy-site/css');
- config.addPassthroughCopy('images');
-
- return {
- dir: {
- input: "./eleventy-site",
- output: "./_site",
- templateFormats : ["njk", "11ty.js"],
- }
- };
-};
-
-
-/*
-
- // watch for changes in css files (to re-run the postcss pipeline)
- config.addWatchTarget("css/*.css");
-
- // Add support for yaml files as data source
- config.addDataExtension("yaml", contents => yaml.safeLoad(contents));
-
- // Filter to debug data passed to templates.
- // Use {{ obj | dump }} to inspect stringified content of the object dumped on the page
- config.addFilter('dump', obj => {
- return util.inspect(obj);
- });
-
-
- // Add aliases (aliases are in relation to the _includes folder)
- // Aliases to layouts
- config.addLayoutAlias('projects', 'layouts/projects.njk');
- config.addLayoutAlias('default', 'layouts/default.njk');
-
- // Add contents of the _projects folder to the projects collection
- config.addCollection("projects", (collection) => collection.getFilteredByGlob("_projects/*.html"));
-
- // Copy files and folders unchanged to output folder
- config.addPassthroughCopy("img");
- config.addPassthroughCopy("CNAME");
- config.addPassthroughCopy(".nojekyll");
-
- return {
- dir: {
- output: "./_site",
- templateFormats : ["njk", "md", "11ty.js"],
- }
- };
-*/
diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index aa6f7c8..8e45396 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -30,12 +30,12 @@ variables:
build:
extends: .build
- only:
- - master
+ # only:
+ # - master
deploy:
extends: .deploy
environment:
- name : ehk-sbox
- only:
- - master
+ name : wp-hx-dev
+ # only:
+ # - master
diff --git a/Dockerfile b/Dockerfile
index ca79dc9..ae78bd6 100644
--- a/Dockerfile
+++ b/Dockerfile
@@ -1,17 +1,20 @@
FROM node:12.16.2
ARG SOURCE_DIR="."
+ARG TARGET_DIR="/srv/ensembl-docs-server"
-RUN mkdir -p /srv/ensembl-docs-server
+RUN mkdir -p ${TARGET_DIR}
-COPY ${SOURCE_DIR} /srv/ensembl-docs-server
+COPY ${SOURCE_DIR} ${TARGET_DIR}
-WORKDIR /srv/ensembl-docs-server
+WORKDIR ${TARGET_DIR}
-ENV NODE_ENV production
+# FIXME: environment variable should be passed from outside (as build-arg? or at runtime?)
+# Note: the following environment variables have to be defined before the build
+ENV HOST=http://193.62.55.158:30799
-RUN npm ci
-RUN npm run build
+RUN npm ci && \
+ npm run build
EXPOSE 3000
diff --git a/api/article.js b/api/article.js
deleted file mode 100644
index 08872f1..0000000
--- a/api/article.js
+++ /dev/null
@@ -1,49 +0,0 @@
-const sqlite = require('sqlite');
-const sqlite3 = require('sqlite3');
-
-const config = require('../config');
-
-const getArticleFromDB = require('../scripts/get-from-database/getArticle');
-const databasePath = process.env.DEPLOYMENT === 'NOW' ? 'build/database.db' : config.databasePath;
-
-const getArticle = async (req, res) => {
- const filePath = req.query.file;
- if (!filePath) {
- res.status(400);
- return res.json({
- error: 'File parameter cannot be empty'
- });
- }
-
- try {
- const db = await sqlite.open({
- filename: databasePath,
- driver: sqlite3.Database
- });
- const match = await getArticleFromDB(db, filePath);
-
- if (match) {
- res.setHeader('Access-Control-Allow-Origin', '*');
- res.json({
- body: match.body,
- data: match.data,
- query: req.query
- });
- } else {
- res.status(404);
- res.json({
- error: `File ${filePath} not found`
- });
- }
- await db.close();
- } catch (error) {
- console.error('Error opening the database', error);
- console.error('Database path:', databasePath);
- res.status(500);
- res.json({
- error: 'There was an error processing your request'
- })
- }
-};
-
-module.exports = getArticle;
diff --git a/api/diagnostics.js b/api/diagnostics.js
deleted file mode 100644
index 0852d69..0000000
--- a/api/diagnostics.js
+++ /dev/null
@@ -1,13 +0,0 @@
-const config = require('../config');
-
-const runDiagnostics = async (req, res) => {
- const databasePath = process.env.DEPLOYMENT === 'NOW' ? 'build/database.db' : config.databasePath;
- const diagnosticsData = {
- deploymentEnv: process.env.DEPLOYMENT,
- databasePath
- };
-
- res.json(diagnosticsData);
-};
-
-module.exports = runDiagnostics;
diff --git a/api/search.js b/api/search.js
deleted file mode 100644
index 8155701..0000000
--- a/api/search.js
+++ /dev/null
@@ -1,55 +0,0 @@
-// const fs = require('fs');
-const sqlite = require('sqlite');
-const sqlite3 = require('sqlite3');
-
-const searchIndex = require('../scripts/searchIndex');
-const getArticleFromDB = require('../scripts/get-from-database/getArticle');
-
-const config = require('../config');
-
-const articlesIndexPath = process.env.DEPLOYMENT === 'NOW'
- ? 'build/indices/articlesIndex.json'
- : config.articlesIndexPath;
-const articlesIndex = require(articlesIndexPath);
-
-const databasePath = process.env.DEPLOYMENT === 'NOW'
- ? 'build/database.db'
- : config.databasePath;
-
-module.exports = async (req, res) => {
- let index;
-
- const { query } = req.query;
- if (!query) {
- res.status(400);
- return res.json({
- error: 'Query parameter cannot be empty'
- });
- }
-
- const searchResults = searchIndex(query, articlesIndex);
-
- try {
- const db = await sqlite.open({
- filename: databasePath,
- driver: sqlite3.Database
- });
- const slugs = searchResults.map(result => result.ref);
- const resultPromises = slugs.map(async (slug) => await getArticleFromDB(db, slug));
- const results = await Promise.all(resultPromises);
-
- res.setHeader('Access-Control-Allow-Origin', '*');
- res.json({
- data: results,
- query: req.query,
- // body: req.body,
- // cookies: req.cookies
- })
- } catch (error) {
- res.status(404);
- res.json({
- error,
- searchResults
- })
- }
-}
diff --git a/build.js b/build.js
deleted file mode 100644
index 624c989..0000000
--- a/build.js
+++ /dev/null
@@ -1,7 +0,0 @@
-const buildIndex = require('./scripts/build-index');
-const buildDatabase = require('./scripts/build-database');
-
-(async () => {
- await buildDatabase();
- await buildIndex();
-})();
diff --git a/config.js b/config.js
deleted file mode 100644
index dc7c43d..0000000
--- a/config.js
+++ /dev/null
@@ -1,19 +0,0 @@
-const path = require('path');
-
-const docsPath = path.resolve(__dirname, 'docs');
-const databaseDirectory = path.resolve(__dirname, 'build');
-const databaseName = 'database.db';
-const indexDirectory = path.resolve(__dirname, 'build/indices');
-const articlesIndexName = 'articlesIndex.json';
-
-module.exports = {
- docsPath,
- articlesPath: path.join(docsPath, 'article'),
- videosPath: path.join(docsPath, 'video'),
- indexDirectory,
- articlesIndexName,
- articlesIndexPath: path.join(indexDirectory, articlesIndexName),
- databaseDirectory,
- databaseName,
- databasePath: path.join(databaseDirectory, databaseName)
-};
diff --git a/config.ts b/config.ts
new file mode 100644
index 0000000..33f2e1a
--- /dev/null
+++ b/config.ts
@@ -0,0 +1,32 @@
+import path from 'path';
+
+const host = process.env.HOST || 'http://127.0.0.1:3000';
+const isProduction = process.env.NODE_ENV === 'production';
+const isBuildingDocs = process.env.NODE_ENV === 'build-docs';
+
+const docsPath = path.resolve(__dirname, 'docs');
+const buildPath = isProduction
+ ? path.resolve(__dirname)
+ : path.resolve(__dirname, 'build');
+const databaseDirectory = buildPath; // FIXME?
+const databaseName = 'database.sqlite';
+const indexDirectory = path.resolve(buildPath, 'indices');
+const articlesIndexName = 'articlesIndex.json';
+const buildImagesPath = path.resolve(buildPath, 'images');
+
+export default {
+ host,
+ isProduction,
+ isBuildingDocs,
+ buildPath,
+ buildImagesPath,
+ docsPath,
+ articlesPath: path.join(docsPath, 'article'),
+ videosPath: path.join(docsPath, 'video'),
+ indexDirectory,
+ articlesIndexName,
+ articlesIndexPath: path.join(indexDirectory, articlesIndexName),
+ databaseDirectory,
+ databaseName,
+ databasePath: path.join(databaseDirectory, databaseName)
+};
diff --git a/decisions/entities.md b/decisions/entities.md
new file mode 100644
index 0000000..c119051
--- /dev/null
+++ b/decisions/entities.md
@@ -0,0 +1,24 @@
+# Article
+## Fields
+- slug — required
+- title - required
+- tags — optional
+- status — optional?
+- parent - optional
+- next - optional
+- body - required
+
+(when a database is built, they will also have the field "path")
+
+# Video
+## Fields
+- slug — required
+- type: 'video'
+- title - required
+- description - optional
+- tags - optional
+- next - optional
+
+
+
+Validation
diff --git a/decisions/questions.md b/decisions/questions.md
new file mode 100644
index 0000000..26e306c
--- /dev/null
+++ b/decisions/questions.md
@@ -0,0 +1,7 @@
+- should slug be globally unique or only unique within a folder?
+- how shall the help&docs app create pages?
+ - what is the entry point?
+ - what should the api response look like?
+- what does a section page (directory page) look like? Is there a common structure for such pages, or are they all different?
+
+Example of a huge TOC file in Azure docs: `https://github.com/MicrosoftDocs/azure-docs/blob/master/articles/azure-sql/toc.yml`
diff --git a/decisions/todo.md b/decisions/todo.md
new file mode 100644
index 0000000..ae2c322
--- /dev/null
+++ b/decisions/todo.md
@@ -0,0 +1,54 @@
+# TODO
+- Fetch all articles for a collection (paginated?)
+- Link related articles
+- Figure out what to do with index pages
+
+## Basic server-side maintenance
+- Add healthcheck endpoint
+- Add proper logging
+
+
+
+
+# Backend
+- Enable api to report menu structure
+ - Q: how many apps (i.e. what data) is the app going to support?
+ - contextual help
+ - Help&Docs app
+ - About Ensembl app?
+ - Ensembl static data (species pages)?
+- Enable entrypoint through the api to build pages
+ - should the entrypoint be just the menu, and then individual pages are requested through subsequent requests, or should all pages be returned en masse (alternatively, as a paginated list)?
+- Rebuild data generation (recurse through the folder structure)
+ - decide what to use for page identifier
+ - make sure images are copied to relevant folder and can be served correctly
+- Decide how to handle section pages (example: getting started page, using Ensembl page, Known bugs page, Contact page). Should we support html pages as well
+
+# Client
+- be able to show pages
+- be able to navigate between pages
+- notice that text and video sections in contextual menu may change independently when you click on a related article/video link
+ - Q: Are contextual menu and page in help&docs app same pages or different?
+
+
+# Consequences
+## Content ids
+- using file paths for ids
+ - Advantages
+ - ensures uniqueness
+ - nicely reflect the url
+ - do not require any involvement from content creators
+ - Disadvantages
+ - things may break if files are moved or renamed
+ - a bit cumbersome in api requests (need to uri-escape slashes)
+- using slugs (or other kind of id)
+ - Advantages
+ - resilience to changes in file system
+ - Disadvantages
+ - requires manual input from content creators
+ - need extra validation code to guarantee uniqueness
+
+It is potentially possible to have both (with slug/id being a potentially optional field)
+
+## Related articles
+If relations are established through the same tag/category, then the order of the articles will be determined automatically (we could sort alphabetically, of course). I suspect that content creators will want full control over the order of related articles, in which case relations should be written out manually.
diff --git a/docs/article/ensembl-select.md b/docs/article/ensembl-select.md
deleted file mode 100644
index 2d45655..0000000
--- a/docs/article/ensembl-select.md
+++ /dev/null
@@ -1,33 +0,0 @@
----
-parent: viewing-ensembl-data
-tags:
- - browser
- - transcript
-status: published
----
-
-# What is Ensembl Select?
-
-<style>
-.scary > blockquote {
- background-color: rgba(237, 51, 21, 0.2);
- border-left-color: #ed3315;
-}
-</style>
-
-<div class="scary">
-
->Caution:
->
->This page describes **experimental features that are not yet available in a stable release**. Don't rely on experimental builds of React in production apps. These features may change significantly and without a warning before they become a part of React.
->
->This documentation is aimed at early adopters and people who are curious. **If you're new to React, don't worry about these features** -- you don't need to learn them right now.
-
-</div>
-
-<iframe width="560" height="315" src="https://www.youtube.com/embed/C2g37X_uMok" frameborder="0" allowfullscreen></iframe>
-
-
-# What is Ensembl Select?
-
-Cras id arcu porttitor, luctus turpis eu, venenatis risus. Curabitur iaculis mauris vitae ipsum euismod, in mattis nisi suscipit. Vestibulum tincidunt suscipit eros. Integer gravida dolor in mi tincidunt, ut luctus lectus consectetur. In vestibulum blandit ipsum, sed pulvinar ipsum posuere eget.
diff --git a/docs/article/getting-started.md b/docs/article/getting-started.md
deleted file mode 100644
index 03e89a8..0000000
--- a/docs/article/getting-started.md
+++ /dev/null
@@ -1,7 +0,0 @@
----
-status: published
----
-
-# Getting Started
-
-Nullam dapibus ligula id dolor molestie, vel lacinia ante consequat. Vestibulum eu magna neque. Integer fermentum ante sit amet ante sagittis, ut mollis lacus maximus. Maecenas cursus magna molestie volutpat lacinia. Fusce vestibulum, elit sit amet semper mattis, quam lectus accumsan felis, eget luctus massa tortor et mauris. Maecenas faucibus dui ex.
diff --git a/docs/article/viewing-ensembl-data.md b/docs/article/viewing-ensembl-data.md
deleted file mode 100644
index 37917e0..0000000
--- a/docs/article/viewing-ensembl-data.md
+++ /dev/null
@@ -1,8 +0,0 @@
----
-parent: using-ensembl
-status: published
----
-
-# Viewing Ensembl data
-
-Curabitur in auctor urna, ac sollicitudin massa. Lorem ipsum dolor sit amet, consectetur adipiscing elit. Nam pellentesque sem ac dictum finibus. Suspendisse iaculis scelerisque quam quis bibendum. Nullam augue felis, laoreet at laoreet vel, mattis sit amet risus. Aliquam imperdiet, enim ut feugiat egestas, augue odio mollis sapien, eu suscipit tellus ante et ligula.
diff --git a/docs/ensembl-help/getting-started/about-the-site.md b/docs/ensembl-help/getting-started/about-the-site.md
new file mode 100644
index 0000000..e00f265
--- /dev/null
+++ b/docs/ensembl-help/getting-started/about-the-site.md
@@ -0,0 +1,5 @@
+---
+status: published
+---
+
+# About the site
diff --git a/docs/ensembl-help/getting-started/faq.md b/docs/ensembl-help/getting-started/faq.md
new file mode 100644
index 0000000..afacb5e
--- /dev/null
+++ b/docs/ensembl-help/getting-started/faq.md
@@ -0,0 +1,5 @@
+---
+status: published
+---
+
+# Frequently asked questions
diff --git a/docs/ensembl-help/getting-started/index.yml b/docs/ensembl-help/getting-started/index.yml
new file mode 100644
index 0000000..3bc4071
--- /dev/null
+++ b/docs/ensembl-help/getting-started/index.yml
@@ -0,0 +1,16 @@
+metadata:
+ title: Getting Started
+ description: Learn how to start using Ensembl website
+ type: landing-page
+
+content:
+
+ - title: What is Ensembl
+ description: Lorem ipsum dolor sit amet, consectetur adipiscing elit. Nam egestas mauris condimentum tempor vulputate.
+ link_text: See more
+ link: what-is-ensembl.md
+
+ - title: About the site
+ description: Sed luctus cursus urna, eu ornare mi ullamcorper gravida. Sed et congue purus.
+ link_text: See more
+ link: about-the-site.md
diff --git a/images/foo/american-red-squirrel.jpg b/docs/ensembl-help/getting-started/media/american-red-squirrel.jpg
similarity index 100%
rename from images/foo/american-red-squirrel.jpg
rename to docs/ensembl-help/getting-started/media/american-red-squirrel.jpg
diff --git a/docs/ensembl-help/getting-started/search.md b/docs/ensembl-help/getting-started/search.md
new file mode 100644
index 0000000..e22ddd0
--- /dev/null
+++ b/docs/ensembl-help/getting-started/search.md
@@ -0,0 +1,7 @@
+---
+title: Search
+description: How to search Ensembl website
+status: published
+---
+
+# Search
diff --git a/docs/article/select-a-species.md b/docs/ensembl-help/getting-started/selecting-a-species.md
similarity index 58%
rename from docs/article/select-a-species.md
rename to docs/ensembl-help/getting-started/selecting-a-species.md
index 255c731..bd88561 100644
--- a/docs/article/select-a-species.md
+++ b/docs/ensembl-help/getting-started/selecting-a-species.md
@@ -1,11 +1,19 @@
---
-parent: getting-started
-related-video: select-a-species
+slug: selecting-a-species
+title: Select a species or assembly
+description: In order to start using Ensembl website, you first need to select a species.
+related_videos:
+ - relativePath: videos/select-a-species.yml
+related_articles:
+ - relativePath: search.md
+ - docsRootPath: ensembl-help/using-ensembl/viewing-ensembl-data/genome-browser/using-the-genome-browser.md
status: published
---
# Select a species or assembly
-Here is example image: 
+## This is updated text
+
+Here is example image: 
Lorem ipsum dolor sit amet, consectetur adipiscing elit. Nam egestas mauris condimentum tempor vulputate. Sed luctus cursus urna, eu ornare mi ullamcorper gravida. Sed et congue purus. Pellentesque eu turpis sit amet ligula malesuada condimentum quis vitae justo. Aenean mattis efficitur nisl. Aenean tortor leo, tempor a justo eget, tincidunt faucibus purus. Praesent at lacinia ligula. Proin lacus justo, finibus vehicula condimentum a, auctor eget tortor. Nam feugiat imperdiet lectus, sed pellentesque arcu facilisis et. Duis vel est lorem. Mauris varius lectus eget tincidunt lacinia.
diff --git a/docs/ensembl-help/getting-started/toc.yml b/docs/ensembl-help/getting-started/toc.yml
new file mode 100644
index 0000000..10cc70a
--- /dev/null
+++ b/docs/ensembl-help/getting-started/toc.yml
@@ -0,0 +1,10 @@
+- name: What is Ensembl
+ href: what-is-ensembl.md
+- name: About the site
+ href: about-the-site.md
+- name: Selecting a species
+ href: selecting-a-species.md
+- name: Search
+ href: search.md
+- name: FAQs
+ href: faq.md
diff --git a/docs/ensembl-help/getting-started/videos/genome-browser.yml b/docs/ensembl-help/getting-started/videos/genome-browser.yml
new file mode 100644
index 0000000..64fce57
--- /dev/null
+++ b/docs/ensembl-help/getting-started/videos/genome-browser.yml
@@ -0,0 +1,3 @@
+title: Genome browser
+description: An overview of the new genome browser.
+url: https://www.youtube.com/embed/C2g37X_uMok
diff --git a/docs/ensembl-help/getting-started/videos/mane-select.yml b/docs/ensembl-help/getting-started/videos/mane-select.yml
new file mode 100644
index 0000000..fb0f4ca
--- /dev/null
+++ b/docs/ensembl-help/getting-started/videos/mane-select.yml
@@ -0,0 +1,3 @@
+title: MANE Select
+description: MANE select vs Ensembl Select
+url: https://www.youtube.com/embed/43p_73zJfIo
diff --git a/docs/ensembl-help/getting-started/videos/select-a-species.yml b/docs/ensembl-help/getting-started/videos/select-a-species.yml
new file mode 100644
index 0000000..070539a
--- /dev/null
+++ b/docs/ensembl-help/getting-started/videos/select-a-species.yml
@@ -0,0 +1,6 @@
+title: Select a species or assembly
+description: How to select a species, strain or assembly.
+url: https://www.youtube.com/embed/v6HKpja5t1M
+related-videos:
+ - genome-browser.yml
+ - mane-select.yml
diff --git a/docs/ensembl-help/getting-started/what-is-ensembl.md b/docs/ensembl-help/getting-started/what-is-ensembl.md
new file mode 100644
index 0000000..1855e34
--- /dev/null
+++ b/docs/ensembl-help/getting-started/what-is-ensembl.md
@@ -0,0 +1,5 @@
+---
+status: published
+---
+
+# What is Ensembl
diff --git a/docs/ensembl-help/toc.yml b/docs/ensembl-help/toc.yml
new file mode 100644
index 0000000..2e3cfe8
--- /dev/null
+++ b/docs/ensembl-help/toc.yml
@@ -0,0 +1,14 @@
+- name: Getting Started
+ href: getting-started
+- name: Using Ensembl
+ href: using-ensembl
+- name: Training
+ href: blah
+- name: Ensembl Annotation & Prediction
+ href: blah
+- name: Data releases
+ href: blah
+- name: Known bugs
+ href: blah
+- name: Contact
+ href: blah
diff --git a/docs/article/using-ensembl.md b/docs/ensembl-help/using-ensembl/citing-ensembl.md
similarity index 97%
rename from docs/article/using-ensembl.md
rename to docs/ensembl-help/using-ensembl/citing-ensembl.md
index ef7e6a3..a6f1aca 100644
--- a/docs/article/using-ensembl.md
+++ b/docs/ensembl-help/using-ensembl/citing-ensembl.md
@@ -2,6 +2,6 @@
status: published
---
-# Using Ensembl
+# Citing Ensembl
Lorem ipsum dolor sit amet, consectetur adipiscing elit. Nam egestas mauris condimentum tempor vulputate. Sed luctus cursus urna, eu ornare mi ullamcorper gravida. Sed et congue purus. Pellentesque eu turpis sit amet ligula malesuada condimentum quis vitae justo. Aenean mattis efficitur nisl. Aenean tortor leo, tempor a justo eget, tincidunt faucibus purus. Praesent at lacinia ligula. Proin lacus justo, finibus vehicula condimentum a, auctor eget tortor. Nam feugiat imperdiet lectus, sed pellentesque arcu facilisis et. Duis vel est lorem. Mauris varius lectus eget tincidunt lacinia.
diff --git a/docs/ensembl-help/using-ensembl/exporting-images.md b/docs/ensembl-help/using-ensembl/exporting-images.md
new file mode 100644
index 0000000..06eb48e
--- /dev/null
+++ b/docs/ensembl-help/using-ensembl/exporting-images.md
@@ -0,0 +1,5 @@
+---
+status: published
+---
+
+# Exporting images
diff --git a/docs/ensembl-help/using-ensembl/external-references.md b/docs/ensembl-help/using-ensembl/external-references.md
new file mode 100644
index 0000000..1ee6339
--- /dev/null
+++ b/docs/ensembl-help/using-ensembl/external-references.md
@@ -0,0 +1,5 @@
+---
+status: published
+---
+
+# External references
diff --git a/docs/ensembl-help/using-ensembl/glossary.md b/docs/ensembl-help/using-ensembl/glossary.md
new file mode 100644
index 0000000..fdb9d0e
--- /dev/null
+++ b/docs/ensembl-help/using-ensembl/glossary.md
@@ -0,0 +1,5 @@
+---
+status: published
+---
+
+# Glossary
diff --git a/docs/ensembl-help/using-ensembl/local-mirror.md b/docs/ensembl-help/using-ensembl/local-mirror.md
new file mode 100644
index 0000000..ca48883
--- /dev/null
+++ b/docs/ensembl-help/using-ensembl/local-mirror.md
@@ -0,0 +1,5 @@
+---
+status: published
+---
+
+# Local mirror
diff --git a/docs/ensembl-help/using-ensembl/roadmap.md b/docs/ensembl-help/using-ensembl/roadmap.md
new file mode 100644
index 0000000..5310aab
--- /dev/null
+++ b/docs/ensembl-help/using-ensembl/roadmap.md
@@ -0,0 +1,5 @@
+---
+status: published
+---
+
+# Roadmap
diff --git a/docs/ensembl-help/using-ensembl/sharing.md b/docs/ensembl-help/using-ensembl/sharing.md
new file mode 100644
index 0000000..b678332
--- /dev/null
+++ b/docs/ensembl-help/using-ensembl/sharing.md
@@ -0,0 +1,5 @@
+---
+status: published
+---
+
+# Sharing
diff --git a/docs/ensembl-help/using-ensembl/toc.yml b/docs/ensembl-help/using-ensembl/toc.yml
new file mode 100644
index 0000000..5157f04
--- /dev/null
+++ b/docs/ensembl-help/using-ensembl/toc.yml
@@ -0,0 +1,22 @@
+- name: Viewing Ensembl data
+ href: viewing-ensembl-data
+- name: Getting Ensembl data
+ href: blah
+- name: Using other data
+ href: blah
+- name: Tools
+ href: blah
+- name: External references
+ href: external-references.md
+- name: Glossary
+ href: glossary.md
+- name: How to set up a local mirror
+ href: local-mirror.md
+- name: Sharing
+ href: sharing.md
+- name: Exporting images
+ href: exporting-images.md
+- name: Citing Ensembl
+ href: citing-ensembl.md
+- name: Roadmap
+ href: roadmap.md
diff --git a/docs/ensembl-help/using-ensembl/viewing-ensembl-data/genome-browser/custom-tracks.md b/docs/ensembl-help/using-ensembl/viewing-ensembl-data/genome-browser/custom-tracks.md
new file mode 100644
index 0000000..02f493f
--- /dev/null
+++ b/docs/ensembl-help/using-ensembl/viewing-ensembl-data/genome-browser/custom-tracks.md
@@ -0,0 +1,5 @@
+---
+status: published
+---
+
+# Custom tracks
diff --git a/docs/ensembl-help/using-ensembl/viewing-ensembl-data/genome-browser/toc.yml b/docs/ensembl-help/using-ensembl/viewing-ensembl-data/genome-browser/toc.yml
new file mode 100644
index 0000000..b9c7fa4
--- /dev/null
+++ b/docs/ensembl-help/using-ensembl/viewing-ensembl-data/genome-browser/toc.yml
@@ -0,0 +1,4 @@
+- name: Using genome browser
+ href: using-the-genome-browser.md
+- name: Custom tracks
+ href: custom-tracks.md
diff --git a/docs/article/using-the-genome-browser.md b/docs/ensembl-help/using-ensembl/viewing-ensembl-data/genome-browser/using-the-genome-browser.md
similarity index 100%
rename from docs/article/using-the-genome-browser.md
rename to docs/ensembl-help/using-ensembl/viewing-ensembl-data/genome-browser/using-the-genome-browser.md
diff --git a/docs/ensembl-help/using-ensembl/viewing-ensembl-data/toc.yml b/docs/ensembl-help/using-ensembl/viewing-ensembl-data/toc.yml
new file mode 100644
index 0000000..780ad05
--- /dev/null
+++ b/docs/ensembl-help/using-ensembl/viewing-ensembl-data/toc.yml
@@ -0,0 +1,14 @@
+- name: Genome browser
+ href: genome-browser
+- name: Entity viewer
+ href: blah
+- name: Sequence viewer
+ href: blah
+- name: Variation viewer
+ href: blah
+- name: Comparative views
+ href: blah
+- name: Pairwise & polyglot views
+ href: blah
+- name: Looking at genes & transcripts
+ href: blah
diff --git a/docs/video/genome-browser.md b/docs/video/genome-browser.md
deleted file mode 100644
index c258cfa..0000000
--- a/docs/video/genome-browser.md
+++ /dev/null
@@ -1,10 +0,0 @@
----
-url: https://www.youtube.com/embed/C2g37X_uMok
-tags:
- - browser
-status: published
----
-
-# Genome browser
-
-An overview of the new genome browser.
diff --git a/docs/video/mane-select.md b/docs/video/mane-select.md
deleted file mode 100644
index c409ecd..0000000
--- a/docs/video/mane-select.md
+++ /dev/null
@@ -1,11 +0,0 @@
----
-url: https://www.youtube.com/embed/43p_73zJfIo
-tags:
- - browser
- - transcript
-status: published
----
-
-# MANE Select
-
-MANE select vs Ensembl Select
diff --git a/docs/video/select-a-species.md b/docs/video/select-a-species.md
deleted file mode 100644
index 39baa81..0000000
--- a/docs/video/select-a-species.md
+++ /dev/null
@@ -1,8 +0,0 @@
----
-url: https://www.youtube.com/embed/v6HKpja5t1M
-status: published
----
-
-# Select a species or assembly
-
-How to select a species, strain or assembly.
diff --git a/eleventy-site/_data/articles.js b/eleventy-site/_data/articles.js
deleted file mode 100644
index f2ce8d7..0000000
--- a/eleventy-site/_data/articles.js
+++ /dev/null
@@ -1,21 +0,0 @@
-const sqlite = require('sqlite');
-const sqlite3 = require('sqlite3');
-
-const config = require('../../config');
-const getArticleFromDB = require('../../scripts/get-from-database/getArticle');
-
-const getArticles = async () => {
-
- const db = await sqlite.open({
- filename: config.databasePath,
- driver: sqlite3.Database
- });
-
- const slugs = await db.all('SELECT filename FROM articles');
- const articlePromises = slugs.map(async ({ filename }) => await getArticleFromDB(db, filename));
- const articles = await Promise.all(articlePromises);
-
- return articles;
-};
-
-module.exports = getArticles;
diff --git a/eleventy-site/_includes/layouts/default.njk b/eleventy-site/_includes/layouts/default.njk
deleted file mode 100644
index c876184..0000000
--- a/eleventy-site/_includes/layouts/default.njk
+++ /dev/null
@@ -1,12 +0,0 @@
-<!doctype html>
-<html lang="en" dir="ltr">
- <head>
- <meta name="description" content="A list of projects linked with the Ensembl projects">
- <link href="/css/styles.css" rel="stylesheet" type="text/css">
- </head>
- <body>
- <main>
- {{ content | safe }}
- </main>
- </body>
-</html>
diff --git a/eleventy-site/articles.njk b/eleventy-site/articles.njk
deleted file mode 100644
index e3dcfdb..0000000
--- a/eleventy-site/articles.njk
+++ /dev/null
@@ -1,25 +0,0 @@
----
-pagination:
- data: articles
- size: 1
- alias: article
-permalink: "articles/{{ article.data.slug }}/"
-layout: default
----
-
-{% if article.data.relatedVideo %}
- <div class="article-with-video-container">
- <div>
- {{ article.body | safe }}
- </div>
- <div>
- <h1>Related video</h1>
- <iframe width="560" height="315" src="{{ article.data.relatedVideo.data.url }}" frameborder="0" allowfullscreen></iframe>
- {{ article.data.relatedVideo.body | safe }}
- </div>
- </div>
-{% else %}
- <div class="simple-article-container">
- {{ article.body | safe }}
- </div>
-{% endif %}
diff --git a/eleventy-site/css/styles.css b/eleventy-site/css/styles.css
deleted file mode 100644
index 72b4626..0000000
--- a/eleventy-site/css/styles.css
+++ /dev/null
@@ -1,19 +0,0 @@
-a, a:visited, a:focus {
- color: blue;
-}
-
-.index-container {
- max-width: 800px;
- margin: auto;
-}
-
-.simple-article-container {
- max-width: 1000px;
- margin: auto;
-}
-
-.article-with-video-container {
- display: grid;
- grid-template-columns: 1.5fr 1fr;
- grid-column-gap: 1rem;
-}
diff --git a/eleventy-site/index.njk b/eleventy-site/index.njk
deleted file mode 100644
index bad8428..0000000
--- a/eleventy-site/index.njk
+++ /dev/null
@@ -1,19 +0,0 @@
----
-layout: default
----
-
-<div class="index-container">
- <h1>
- Available articles
- </h1>
- <ul>
- {% for article in articles %}
- <li>
- <a href="/articles/{{ article.data.slug }}">{{ article.data.slug }}</a>
- </li>
- {% else %}
- <li>There are no articles</li>
- {% endfor %}
- </ul>
-
-</div>
diff --git a/k8s/deployment.yaml b/k8s/deployment.yaml
index 0811c6e..1948896 100644
--- a/k8s/deployment.yaml
+++ b/k8s/deployment.yaml
@@ -1,18 +1,18 @@
apiVersion: apps/v1beta1
kind: Deployment
metadata:
- name: ensembl-docs-prototype-deployment
+ name: ensembl-help-and-docs-deployment
spec:
replicas: 1
template:
metadata:
labels:
- app: ensembl-docs-prototype
+ app: ensembl-help-and-docs
spec:
imagePullSecrets:
- - name: ensembl-docs-prototype-secret
+ - name: ensembl-help-and-docs-pull-secret
containers:
- - name: ensembl-docs-prototype
+ - name: ensembl-help-and-docs
image: <DOCKER_IMAGE>
command: [ "npm", "run", "start-server" ]
ports:
diff --git a/k8s/service-node.yaml b/k8s/service-node.yaml
index 52f5bcb..9608b06 100644
--- a/k8s/service-node.yaml
+++ b/k8s/service-node.yaml
@@ -1,12 +1,12 @@
apiVersion: v1
kind: Service
metadata:
- name: ensembl-docs-prototype-svc
+ name: ensembl-help-and-docs-svc
labels:
- app: ensembl-docs-prototype-svc
+ app: ensembl-help-and-docs-svc
spec:
selector:
- app: ensembl-docs-prototype
+ app: ensembl-help-and-docs
type: NodePort
ports:
- port: 8000
diff --git a/package-lock.json b/package-lock.json
index f0bd2c9..d668afe 100644
--- a/package-lock.json
+++ b/package-lock.json
@@ -1,76 +1,9 @@
{
- "name": "markdown-server",
+ "name": "ensembl-help-and-docs-api",
"version": "1.0.0",
"lockfileVersion": 1,
"requires": true,
"dependencies": {
- "@11ty/dependency-tree": {
- "version": "1.0.0",
- "resolved": "https://registry.npmjs.org/@11ty/dependency-tree/-/dependency-tree-1.0.0.tgz",
- "integrity": "sha512-2FWYlkphQ/83MG7b9qqBJfJJ0K9zupNz/6n4EdDuNLw6hQHGp4Sp4UMDRyBvA/xCTYDBaPSuSjHuu45tSujegg=="
- },
- "@11ty/eleventy": {
- "version": "0.10.0",
- "resolved": "https://registry.npmjs.org/@11ty/eleventy/-/eleventy-0.10.0.tgz",
- "integrity": "sha512-GOgG5ZvFfdJ4fMDlF+OHLQyvwu4cDkCdE8U0x/cfKze2Bu+27htaJ7qW8XbaGArySlBvYGhJD/z8vjdn/+hpLw==",
- "requires": {
- "@11ty/dependency-tree": "^1.0.0",
- "browser-sync": "^2.26.7",
- "chalk": "^3.0.0",
- "chokidar": "^3.3.1",
- "debug": "^4.1.1",
- "dependency-graph": "^0.8.1",
- "ejs": "^2.6.2",
- "fast-glob": "^3.1.1",
- "fs-extra": "^8.1.0",
- "gray-matter": "^4.0.2",
- "hamljs": "^0.6.2",
- "handlebars": "^4.5.3",
- "javascript-stringify": "^2.0.1",
- "liquidjs": "^6.4.3",
- "lodash": "^4.17.15",
- "luxon": "^1.21.3",
- "markdown-it": "^8.4.2",
- "minimist": "^1.2.0",
- "moo": "^0.5.1",
- "multimatch": "^4.0.0",
- "mustache": "^2.3.0",
- "normalize-path": "^3.0.0",
- "nunjucks": "^3.2.0",
- "parse-filepath": "^1.0.2",
- "please-upgrade-node": "^3.2.0",
- "pretty": "^2.0.0",
- "pug": "^2.0.4",
- "recursive-copy": "^2.0.10",
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- "integrity": "sha1-EEqOSqym09jNFXqO+L+rLXo//bY="
+ "integrity": "sha512-7NXolsK4CAS5+xvdj5OMMbI962hU/wvwoxk+LWR9Ek9bVtyuuYScDN6eS0rUm6TxApFpw7CX1o4uJzcd4AyD3Q==",
+ "dev": true
},
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+ "integrity": "sha1-Spzvcdr0wAHB2B1j0UDPU/1oifQ=",
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+ "dev": true,
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@@ -2932,92 +1726,41 @@
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- "integrity": "sha1-dfFmQrSA8YenEcgUFh/TpKdlWJg=",
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- "integrity": "sha1-3mMSg3P8v3w8z6TeWkgMRaZ5WOs="
+ "integrity": "sha1-3mMSg3P8v3w8z6TeWkgMRaZ5WOs=",
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- "integrity": "sha1-sSTeXE+6/LpUH0j/pzlw9KpFa08=",
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}
}
}
diff --git a/package.json b/package.json
index cd8fe53..77b1359 100644
--- a/package.json
+++ b/package.json
@@ -1,39 +1,57 @@
{
- "name": "markdown-server",
+ "name": "ensembl-help-and-docs-api",
"version": "1.0.0",
"description": "",
"main": "index.js",
"scripts": {
- "clean": "rm -rf ./build _site",
- "prebuild": "npm run clean",
- "build": "mkdirp build && node ./build.js && npm run eleventy-build",
- "start-server": "node server/server.js",
- "eleventy-clean": "rm -rf _site",
- "start-eleventy": "npm run eleventy-clean && eleventy --serve",
- "eleventy-build": "eleventy"
+ "clean": "rm -rf ./build",
+ "dev": "ts-node-dev --respawn --transpileOnly src/server/index.ts",
+ "prebuild": "npm run clean && mkdirp build",
+ "build": "npm run build-docs && npm run build-server",
+ "build-docs": "NODE_ENV=build-docs ts-node ./src/build-scripts/index.ts",
+ "build-server": "tsc",
+ "start-server": "NODE_ENV=production node build/src/server/index.js"
},
"keywords": [],
"author": "",
"license": "ISC",
"dependencies": {
- "@11ty/eleventy": "0.10.0",
- "cross-fetch": "3.0.4",
+ "cors": "2.8.5",
+ "cross-fetch": "3.0.5",
"express": "4.17.1",
+ "fs-extra": "9.0.1",
+ "globby": "11.0.1",
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"lunr": "2.3.8",
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+ "@types/cors": "2.8.7",
+ "@types/express": "4.17.7",
+ "@types/fs-extra": "9.0.1",
+ "@types/lodash": "4.14.159",
+ "@types/sqlite3": "3.1.6",
+ "@types/unist": "2.0.3",
+ "@types/validator": "13.1.0",
"mkdirp": "1.0.4",
+ "nodemon": "2.0.4",
"rehype-raw": "4.0.2",
- "rehype-stringify": "7.0.0",
- "remark-extract-frontmatter": "2.0.2",
+ "rehype-stringify": "8.0.0",
+ "remark-extract-frontmatter": "2.0.3",
"remark-frontmatter": "2.0.0",
- "remark-parse": "8.0.0",
- "remark-rehype": "6.0.0",
- "remark-stringify": "8.0.0",
- "sqlite": "4.0.6",
- "sqlite3": "4.1.1",
+ "remark-parse": "8.0.3",
+ "remark-rehype": "7.0.0",
+ "remark-stringify": "8.1.1",
"strip-markdown": "3.1.2",
"to-vfile": "6.1.0",
- "unified": "9.0.0",
- "unist-util-visit": "2.0.2",
- "yaml": "1.8.3"
+ "ts-node": "8.10.2",
+ "ts-node-dev": "1.0.0-pre.48",
+ "tsconfig-paths": "3.9.0",
+ "typescript": "3.9.7",
+ "unified": "9.1.0",
+ "unist-util-visit": "2.0.3",
+ "yaml": "1.10.0"
}
}
diff --git a/scripts/build-database/addArticles.js b/scripts/build-database/addArticles.js
deleted file mode 100644
index 14b9e85..0000000
--- a/scripts/build-database/addArticles.js
+++ /dev/null
@@ -1,44 +0,0 @@
-const { addArticleTags } = require('./addTags');
-
-const addArticles = async (db, articles) => {
- for (article of articles) {
- article = addParents(article, articles);
- await insertArticle(db, article);
- await addArticleTags(db, article);
- }
-};
-
-const insertArticle = async (db, fileData) => {
- const { html, ...otherFields } = fileData;
- const sql = `INSERT INTO articles(filename, body, data) VALUES (:filename, :body, :data)`;
- await db.run(sql, {
- ':filename': fileData.slug,
- ':body': html,
- ':data': JSON.stringify(otherFields)
- });
-};
-
-
-const addParents = (article, articles) => {
- if (!article.parent) {
- return article;
- }
- return buildParents(article, articles);
-};
-
-const buildParents = (article, articles, parent) => {
- if (!article.parents) {
- article.parents = [];
- }
- const nextParentName = parent ? parent.parent : article.parent;
- const nextParent = articles.find(({ slug }) => slug === nextParentName);
-
- if (!nextParent) {
- return article;
- } else {
- article = Object.assign({}, article, { parents: [...article.parents, nextParent.slug] });
- return buildParents(article, articles, nextParent);
- }
-};
-
-module.exports = addArticles;
diff --git a/scripts/build-database/addTags.js b/scripts/build-database/addTags.js
deleted file mode 100644
index 800164f..0000000
--- a/scripts/build-database/addTags.js
+++ /dev/null
@@ -1,53 +0,0 @@
-const addArticleTags = async (db, article) => {
- const { slug, tags } = article;
- if (!tags) {
- return;
- }
- await addTags(db, tags);
-
- for (tag of tags) {
- const { id: savedArticleId } = await db.get('SELECT id FROM articles WHERE filename = ?', slug);
- const { id: savedTagId } = await db.get('SELECT id FROM tags WHERE name = ?', tag);
- await db.run('INSERT INTO articles_tags (article_id, tag_id) VALUES (:articleId, :tagId)', {
- ':articleId': savedArticleId,
- ':tagId': savedTagId
- });
- }
-};
-
-const addVideoTags = async (db, video) => {
- const { slug, tags } = video;
- if (!tags) {
- return;
- }
- await addTags(db, tags);
-
- for (tag of tags) {
- const { id: savedVideoId } = await db.get('SELECT id FROM videos WHERE filename = ?', slug);
- const { id: savedTagId } = await db.get('SELECT id FROM tags WHERE name = ?', tag);
- await db.run('INSERT INTO videos_tags (video_id, tag_id) VALUES (:video_id, :tagId)', {
- ':video_id': savedVideoId,
- ':tagId': savedTagId
- });
- }
-};
-
-const addTags = async (db, tags) => {
- for (tag of tags) {
- await addTag(db, tag);
- }
-}
-
-const addTag = async (db, tag) => {
- const result = await db.get('SELECT id FROM tags WHERE name = ?', tag);
- const { id: savedTagId } = result || {};
-
- if (!savedTagId) {
- await db.run('INSERT INTO tags (name) VALUES (?)', tag);
- }
-};
-
-module.exports = {
- addArticleTags,
- addVideoTags
-};
diff --git a/scripts/build-database/addVideos.js b/scripts/build-database/addVideos.js
deleted file mode 100644
index 447ed32..0000000
--- a/scripts/build-database/addVideos.js
+++ /dev/null
@@ -1,20 +0,0 @@
-const { addVideoTags } = require('./addTags');
-
-const addVideos = async (db, videos) => {
- for (video of videos) {
- await insertVideo(db, video);
- await addVideoTags(db, video);
- }
-};
-
-const insertVideo = async (db, video) => {
- const { html, ...otherFields } = video;
- const sql = `INSERT INTO videos(filename, body, data) VALUES (:filename, :body, :data)`;
- await db.run(sql, {
- ':filename': video.slug,
- ':body': html,
- ':data': JSON.stringify(otherFields)
- });
-};
-
-module.exports = addVideos;
diff --git a/scripts/build-database/createDatabase.js b/scripts/build-database/createDatabase.js
deleted file mode 100644
index 28c4878..0000000
--- a/scripts/build-database/createDatabase.js
+++ /dev/null
@@ -1,45 +0,0 @@
-const sqlite = require('sqlite');
-const sqlite3 = require('sqlite3');
-
-const sql = `
- CREATE TABLE articles (
- id integer PRIMARY KEY,
- filename text NOT NULL,
- body text NOT NULL,
- data text
- );
- CREATE TABLE videos (
- id integer PRIMARY KEY,
- filename text NOT NULL,
- body text NOT NULL,
- data text
- );
- CREATE TABLE tags (
- id integer PRIMARY KEY,
- name text NOT NULL
- );
- CREATE TABLE articles_tags (
- id integer PRIMARY KEY,
- article_id text NOT NULL,
- tag_id integer NOT NULL
- );
- CREATE TABLE videos_tags (
- id integer PRIMARY KEY,
- video_id text NOT NULL,
- tag_id integer NOT NULL
- );
-`;
-
-const config = require('../../config');
-
-const createDatabase = async () => {
- sqlite3.verbose();
- const db = await sqlite.open({
- filename: config.databasePath,
- driver: sqlite3.Database
- });
- await db.exec(sql);
- return db;
-};
-
-module.exports = createDatabase;
diff --git a/scripts/build-database/index.js b/scripts/build-database/index.js
deleted file mode 100644
index 145acd7..0000000
--- a/scripts/build-database/index.js
+++ /dev/null
@@ -1,18 +0,0 @@
-const createDatabase = require('./createDatabase');
-const readSourceFiles = require('./readSourceFiles');
-const addArticles = require('./addArticles');
-const addVideos = require('./addVideos');
-
-const buildDatabase = async () => {
- try {
- const db = await createDatabase();
- const files = await readSourceFiles();
- await addArticles(db, files.articles);
- await addVideos(db, files.videos);
- console.log('Documentation database generated successfully');
- } catch (error) {
- console.error('Error building the database', error);
- }
-};
-
-module.exports = buildDatabase;
diff --git a/scripts/build-database/markdownImagePlugin.js b/scripts/build-database/markdownImagePlugin.js
deleted file mode 100644
index e94a2ff..0000000
--- a/scripts/build-database/markdownImagePlugin.js
+++ /dev/null
@@ -1,19 +0,0 @@
-const visit = require('unist-util-visit');
-
-const attacher = () => {
- const transformer = (tree, file) => {
- visit(tree, 'image', imageVisitor);
- };
-
- return transformer;
-};
-
-const imageVisitor = (node) => {
- let host;
- if (process.env.NODE_ENV === 'production') {
- host = 'http://193.62.55.158:30799';
- node.url = `${host}${node.url}`;
- }
-};
-
-module.exports = attacher;
diff --git a/scripts/build-database/parseMarkdown.js b/scripts/build-database/parseMarkdown.js
deleted file mode 100644
index af04839..0000000
--- a/scripts/build-database/parseMarkdown.js
+++ /dev/null
@@ -1,34 +0,0 @@
-const vfile = require('to-vfile');
-const unified = require('unified');
-const parse = require('remark-parse');
-const remark2rehype = require('remark-rehype');
-const raw = require('rehype-raw');
-const extract = require('remark-extract-frontmatter');
-const html = require('rehype-stringify');
-const frontmatter = require('remark-frontmatter');
-const yaml = require('yaml').parse;
-
-const imagePlugin = require('./markdownImagePlugin');
-
-const parseMarkdown = async (pathToFile) => {
- return await new Promise((resolve, reject) => {
- unified()
- .use(parse)
- .use(frontmatter, ['yaml', 'toml'])
- .use(extract, { yaml: yaml })
- .use(imagePlugin)
- .use(remark2rehype, {allowDangerousHtml: true})
- .use(raw)
- .use(html)
- .process(vfile.readSync(pathToFile), function(err, file) {
- if (err) {
- reject(err);
- } else {
- const html = String(file);
- resolve(Object.assign({}, file.data, { html }));
- }
- });
- });
-};
-
-module.exports = parseMarkdown;
diff --git a/scripts/build-database/readSourceFiles.js b/scripts/build-database/readSourceFiles.js
deleted file mode 100644
index 9feb0df..0000000
--- a/scripts/build-database/readSourceFiles.js
+++ /dev/null
@@ -1,29 +0,0 @@
-const fs = require('fs');
-const path = require('path');
-
-const config = require('../../config');
-const parseMarkdown = require('./parseMarkdown');
-
-const readSourceFiles = async () => {
- const { articlesPath, videosPath } = config;
- const articles = await readFilesFromDir(articlesPath);
- const videos = await readFilesFromDir(videosPath);
-
- return {
- articles,
- videos
- };
-};
-
-const readFilesFromDir = async (dir) => {
- const promisedData = fs.readdirSync(dir)
- .map(async fileName => {
- const slug = fileName.replace(/\.md$/, '');
- const filePath = path.join(dir, fileName);
- const fileData = await parseMarkdown(filePath);
- return Object.assign({}, fileData, { slug });
- });
- return await Promise.all(promisedData);
-};
-
-module.exports = readSourceFiles;
diff --git a/scripts/build-index/indexArticles.js b/scripts/build-index/indexArticles.js
deleted file mode 100644
index 6bd4407..0000000
--- a/scripts/build-index/indexArticles.js
+++ /dev/null
@@ -1,16 +0,0 @@
-const lunr = require('lunr');
-
-const indexArticles = (articles) => {
- const index = lunr(function() {
- this.ref('slug');
- this.field('text');
-
- articles.forEach(function(article) {
- this.add(article);
- }, this);
- });
-
- return index;
-};
-
-module.exports = indexArticles;
diff --git a/scripts/build-index/parseFile.js b/scripts/build-index/parseFile.js
deleted file mode 100644
index 090bd0f..0000000
--- a/scripts/build-index/parseFile.js
+++ /dev/null
@@ -1,30 +0,0 @@
-const vfile = require('to-vfile');
-const unified = require('unified');
-const parse = require('remark-parse');
-const extract = require('remark-extract-frontmatter');
-const frontmatter = require('remark-frontmatter');
-const strip = require('strip-markdown');
-const stringify = require('remark-stringify')
-const yaml = require('yaml').parse;
-
-
-const parseMarkdown = async (filePath) => {
- return await new Promise((resolve, reject) => {
- unified()
- .use(parse)
- .use(frontmatter, ['yaml', 'toml'])
- .use(extract, { yaml })
- .use(strip)
- .use(stringify)
- .process(vfile.readSync(filePath), function(err, file) {
- if (err) {
- reject(err);
- } else {
- const text = String(file);
- resolve({ text });
- }
- });
- });
-};
-
-module.exports = parseMarkdown;
diff --git a/scripts/build-index/readSourceFiles.js b/scripts/build-index/readSourceFiles.js
deleted file mode 100644
index 2ae08fc..0000000
--- a/scripts/build-index/readSourceFiles.js
+++ /dev/null
@@ -1,27 +0,0 @@
-const fs = require('fs');
-const path = require('path');
-
-const config = require('../../config');
-const parseFile = require('./parseFile');
-
-const readSourceFiles = async () => {
- const { articlesPath } = config;
- const articles = await readFilesFromDir(articlesPath);
-
- return {
- articles
- };
-};
-
-const readFilesFromDir = async (dir) => {
- const promisedData = fs.readdirSync(dir)
- .map(async fileName => {
- const slug = fileName.replace(/\.md$/, '');
- const filePath = path.join(dir, fileName);
- const fileData = await parseFile(filePath);
- return Object.assign({}, fileData, { slug });
- });
- return await Promise.all(promisedData);
-};
-
-module.exports = readSourceFiles;
diff --git a/scripts/build-index/saveArticlesIndex.js b/scripts/build-index/saveArticlesIndex.js
deleted file mode 100644
index 3701e1f..0000000
--- a/scripts/build-index/saveArticlesIndex.js
+++ /dev/null
@@ -1,12 +0,0 @@
-const fs = require('fs');
-const mkdirp = require('mkdirp');
-
-const config = require('../../config');
-
-const saveArticlesIndex = async (index) => {
- const outputDirectory = await mkdirp(config.indexDirectory);
- fs.writeFileSync(config.articlesIndexPath, JSON.stringify(index));
- console.log('Index file generated successfully');
-};
-
-module.exports = saveArticlesIndex;
diff --git a/scripts/get-from-database/getArticle.js b/scripts/get-from-database/getArticle.js
deleted file mode 100644
index 33b6c3f..0000000
--- a/scripts/get-from-database/getArticle.js
+++ /dev/null
@@ -1,25 +0,0 @@
-const getVideo = require('./getVideo');
-
-const getArticle = async (db, slug) => {
- try {
- const match = await db.get('SELECT * FROM articles WHERE filename = ?', slug);
- if (!match) {
- return;
- }
- match.data = JSON.parse(match.data);
-
- const relatedVideoSlug = match.data['related-video'];
-
- if (relatedVideoSlug) {
- const relatedVideo = await getVideo(db, relatedVideoSlug);
- match.data.relatedVideo = relatedVideo;
- }
-
- return match;
- } catch (error) {
- console.log('error getting the document', error);
- }
-};
-
-
-module.exports = getArticle;
diff --git a/scripts/get-from-database/getVideo.js b/scripts/get-from-database/getVideo.js
deleted file mode 100644
index ad24e9e..0000000
--- a/scripts/get-from-database/getVideo.js
+++ /dev/null
@@ -1,15 +0,0 @@
-const getVideo = async (db, slug) => {
- try {
- const match = await db.get('SELECT * FROM videos WHERE filename = ?', slug);
- if (!match) {
- return;
- }
- match.data = JSON.parse(match.data);
- return match;
- } catch (error) {
- console.log('error getting the document', error);
- }
-};
-
-
-module.exports = getVideo;
diff --git a/scripts/getFromDatabase.js b/scripts/getFromDatabase.js
deleted file mode 100644
index 6e178bd..0000000
--- a/scripts/getFromDatabase.js
+++ /dev/null
@@ -1,17 +0,0 @@
-const getOneDocument = async (db, name) => {
- try {
- const match = await db.get('SELECT * FROM documents WHERE name = ?', name);
- if (!match) {
- return;
- }
- match.data = JSON.parse(match.data);
- return match;
- } catch (error) {
- console.log('error getting the document', error);
- }
-};
-
-
-module.exports = {
- getOneDocument
-};
diff --git a/scripts/searchIndex.js b/scripts/searchIndex.js
deleted file mode 100644
index fd197b0..0000000
--- a/scripts/searchIndex.js
+++ /dev/null
@@ -1,9 +0,0 @@
-const path = require('path');
-const lunr = require('lunr');
-
-const searchIndex = (query, index) => {
- const idx = lunr.Index.load(index);
- return idx.search(query);
-};
-
-module.exports = searchIndex;
diff --git a/server/app.js b/server/app.js
deleted file mode 100644
index 3359e44..0000000
--- a/server/app.js
+++ /dev/null
@@ -1,13 +0,0 @@
-const path = require('path');
-const express = require('express');
-const app = express();
-
-const getArticle = require('../api/article');
-const search = require('../api/search');
-
-app.use(express.static(path.join(__dirname, '../_site')));
-
-app.use('/api/article', getArticle);
-app.use('/api/search', search);
-
-module.exports = app;
diff --git a/server/server.js b/server/server.js
deleted file mode 100644
index b03c5e3..0000000
--- a/server/server.js
+++ /dev/null
@@ -1,5 +0,0 @@
-const app = require('./app');
-
-const port = 3000;
-
-app.listen(port, () => console.log(`Listening at http://localhost:${port}`));
diff --git a/src/build-scripts/build-database/addArticles.ts b/src/build-scripts/build-database/addArticles.ts
new file mode 100644
index 0000000..f4774b8
--- /dev/null
+++ b/src/build-scripts/build-database/addArticles.ts
@@ -0,0 +1,109 @@
+import fs from 'fs';
+import yaml from 'yaml';
+
+import {
+ fromDocumentsRoot,
+ stripFileExtensions,
+ buildPathToRelatedItem
+} from '../filePathHelpers';
+
+import { Article, Video, Collection } from '../../models';
+
+import { ParsedArticle } from 'src/types/ParsedArticle';
+import { search } from 'src/controllers/searchController';
+
+const addArticles = async (articles: ParsedArticle[]) => {
+ // first, save all articles to db
+ const savedResults: Array<{ parsedArticle: ParsedArticle, articleInstance: Article }> = [];
+
+ for (const article of articles) {
+ const articleModelInstance = await createArticle(article);
+ savedResults.push({
+ parsedArticle: article,
+ articleInstance: articleModelInstance
+ });
+ }
+
+ // then iterate over the saved articles to establish relationships between them
+ for (let { parsedArticle, articleInstance } of savedResults) {
+ const { related_articles } = parsedArticle;
+ if (!related_articles) {
+ continue;
+ }
+
+ for (let relation of related_articles) {
+ let searchKey: string, searchValue: string;
+ if ('slug' in relation) {
+ searchKey = 'slug';
+ searchValue = relation.slug;
+ } else {
+ searchKey = 'path';
+ searchValue = stripFileExtensions(buildPathToRelatedItem({
+ sourceFilePath: parsedArticle.filePath,
+ relation
+ }));
+ }
+ const relatedArticle = await Article.findOne({ where: { [searchKey]: searchValue } });
+ articleInstance.addRelatedArticle(relatedArticle);
+ }
+ }
+};
+
+const createArticle = async (article: ParsedArticle) => {
+ const newArticle = await Article.create({
+ title: article.title || 'empty title',
+ description: article.description || 'empty description',
+ path: article.path,
+ file_path: article.filePath,
+ slug: article.slug,
+ body: article.html
+ });
+
+ if (article.related_videos) {
+ const videoPaths = article.related_videos.map(relation => buildPathToRelatedItem({
+ sourceFilePath: article.filePath,
+ relation,
+ returnAbsolutePath: true
+ }));
+
+ for (const videoPath of videoPaths) {
+ const fromDocsPath = stripFileExtensions(fromDocumentsRoot(videoPath));
+ const savedVideo = await Video.findOne({ where: { file_path: fromDocsPath } });
+ if (savedVideo) {
+ continue;
+ }
+ const fileContent = fs.readFileSync(videoPath, 'utf-8');
+ const parsedVideo = yaml.parse(fileContent);
+
+ const video = await Video.create({
+ title: parsedVideo.title,
+ description: parsedVideo.description,
+ url: parsedVideo.url,
+ file_path: fromDocsPath
+ });
+
+ await newArticle.addVideo(video);
+ }
+ }
+
+ const collectionName = article.path.split('/').shift();
+ const collection = await getCollection(collectionName);
+ collection.addArticle(newArticle);
+
+ await Article.sync();
+
+ return newArticle;
+};
+
+
+const getCollection = async (name: string) => {
+ const savedCollection = await Collection.findOne({ where: { name } });
+ if (savedCollection) {
+ return savedCollection;
+ } else {
+ const collection = await Collection.create({ name });
+ return collection;
+ }
+};
+
+export default addArticles;
diff --git a/src/build-scripts/build-database/addMenus.ts b/src/build-scripts/build-database/addMenus.ts
new file mode 100644
index 0000000..24a9d5c
--- /dev/null
+++ b/src/build-scripts/build-database/addMenus.ts
@@ -0,0 +1,14 @@
+import { Menu } from '../../models';
+
+import { Menus } from './buildMenus';
+
+const addMenus = async (menus: Menus) => {
+ for (const menu of menus) {
+ await Menu.create({
+ name: menu.name,
+ data: JSON.stringify(menu.data)
+ });
+ }
+};
+
+export default addMenus;
diff --git a/src/build-scripts/build-database/buildMenus.ts b/src/build-scripts/build-database/buildMenus.ts
new file mode 100644
index 0000000..37e9e52
--- /dev/null
+++ b/src/build-scripts/build-database/buildMenus.ts
@@ -0,0 +1,52 @@
+import fs from 'fs';
+import path from 'path';
+import yaml from 'yaml';
+
+import config from '../../../config';
+
+import { MenuItem } from 'src/types/ParsedMenu';
+
+export type Menus = Array<{
+ name: string;
+ data: MenuItem[]
+}>;
+
+const buildMenus = () => {
+ const ensemblHelpMenuEntryPath = path.resolve(config.docsPath, 'ensembl-help');
+
+ // returning an array of a single menu, because expecting more menus in future
+ return [{
+ name: 'ensembl-help',
+ data: populateMenu(ensemblHelpMenuEntryPath)
+ }];
+};
+
+const populateMenu = (folderPath: string): MenuItem[] => {
+ const tocPath = path.resolve(folderPath, 'toc.yml');
+ const exists = fs.statSync(tocPath).isFile();
+ if (!exists) {
+ return;
+ }
+ const unparsedToc = fs.readFileSync(tocPath, 'utf-8');
+ const toc = yaml.parse(unparsedToc);
+ const result = toc.map((menuItem: MenuItem) => {
+ if (menuItem.href === 'blah') {
+ // FIXME: remove this temporary branch
+ return menuItem;
+ } else if (menuItem.href) {
+ const itemPath = path.resolve(folderPath, menuItem.href);
+ const stats = fs.lstatSync(itemPath);
+ if (stats.isDirectory()) {
+ const submenu = populateMenu(itemPath);
+ menuItem.items = submenu;
+ } else if (stats.isFile()) {
+ const internalPath = itemPath.substring(config.docsPath.length + 1);
+ menuItem = Object.assign({}, menuItem, { path: internalPath });
+ }
+ }
+ return menuItem;
+ });
+ return result;
+};
+
+export default buildMenus;
diff --git a/src/build-scripts/build-database/index.ts b/src/build-scripts/build-database/index.ts
new file mode 100644
index 0000000..612c6d5
--- /dev/null
+++ b/src/build-scripts/build-database/index.ts
@@ -0,0 +1,23 @@
+import prepareDatabase from '../../db/prepareDatabase';
+import readSourceFiles from './readSourceFiles';
+import addArticles from './addArticles';
+import buildMenus from './buildMenus';
+import addMenus from './addMenus';
+
+const buildDatabase = async () => {
+ try {
+ await prepareDatabase();
+ const files = await readSourceFiles();
+ await addArticles(files.articles);
+ console.log('Documentation database generated successfully');
+
+ const menus = buildMenus();
+ await addMenus(menus);
+ console.log('Menus added to the database');
+
+ } catch (error) {
+ console.error('Error building the database', error);
+ }
+};
+
+export default buildDatabase;
diff --git a/src/build-scripts/build-database/markdownImagePlugin.ts b/src/build-scripts/build-database/markdownImagePlugin.ts
new file mode 100644
index 0000000..e68d835
--- /dev/null
+++ b/src/build-scripts/build-database/markdownImagePlugin.ts
@@ -0,0 +1,27 @@
+import visit from 'unist-util-visit';
+import { Node } from 'unist'
+
+import config from '../../../config';
+
+const attacher = () => {
+ const transformer = (tree: Node, file: any) => {
+ // FIXME: the file parameter is vfile
+ const { path: filePath } = file;
+ visit(tree, 'image', imageVisitor(filePath));
+ };
+
+ return transformer;
+};
+
+const imageVisitor = (filePath: string) => (node: Node) => {
+ const markdownDirectory = filePath.substring(config.docsPath.length + 1)
+ .split('/')
+ .slice(0, -1)
+ .join('/');
+ const destPath = `/images/${markdownDirectory}/${node.url}`;
+
+ const { host } = config;
+ node.url = `${host}${destPath}`;
+};
+
+export default attacher;
diff --git a/src/build-scripts/build-database/parseMarkdown.ts b/src/build-scripts/build-database/parseMarkdown.ts
new file mode 100644
index 0000000..b0a3a88
--- /dev/null
+++ b/src/build-scripts/build-database/parseMarkdown.ts
@@ -0,0 +1,38 @@
+import unified from 'unified';
+// @ts-ignore
+import vfile from 'to-vfile';
+import parse from 'remark-parse';
+import remark2rehype from 'remark-rehype';
+// @ts-ignore
+import raw from 'rehype-raw';
+// @ts-ignore
+import extract from 'remark-extract-frontmatter';
+import frontmatter from 'remark-frontmatter';
+// @ts-ignore
+import html from 'rehype-stringify';
+import yaml from 'yaml';
+
+import imagePlugin from './markdownImagePlugin';
+
+const parseMarkdown = async (pathToFile: string) => {
+ return await new Promise((resolve, reject) => {
+ unified()
+ .use(parse)
+ .use(frontmatter, ['yaml', 'toml'])
+ .use(extract, { yaml: yaml.parse })
+ .use(imagePlugin)
+ .use(remark2rehype, {allowDangerousHtml: true})
+ .use(raw)
+ .use(html)
+ .process(vfile.readSync(pathToFile), function(err, file) {
+ if (err) {
+ reject(err);
+ } else {
+ const html = String(file);
+ resolve(Object.assign({}, file.data, { html }));
+ }
+ });
+ });
+};
+
+export default parseMarkdown;
diff --git a/src/build-scripts/build-database/readSourceFiles.ts b/src/build-scripts/build-database/readSourceFiles.ts
new file mode 100644
index 0000000..233ab97
--- /dev/null
+++ b/src/build-scripts/build-database/readSourceFiles.ts
@@ -0,0 +1,51 @@
+import fs from 'fs';
+import globby from 'globby';
+import yaml from 'yaml';
+
+import config from '../../../config';
+import parseMarkdown from './parseMarkdown';
+import {
+ slugifyPath,
+ stripFileExtensions
+ } from '../filePathHelpers';
+
+const readSourceFiles = async () => {
+ const { docsPath } = config;
+ const filePatterns = [
+ `${docsPath}/**/*.md`,
+ `${docsPath}/**/index.yml`
+ ];
+ const filePaths = await globby(filePatterns);
+ const articles = await Promise.all(filePaths.map(async (filePath) => {
+ const pathWithinDocsDir = filePath.substring(docsPath.length + 1);
+ const articlePath = stripFileExtensions(pathWithinDocsDir);
+ let slug = slugifyPath(pathWithinDocsDir);
+ let parsedFileContent;
+ if (isMarkdownFile(filePath)) {
+ parsedFileContent = await parseMarkdown(filePath);
+ } else if (isYamlFile(filePath)) {
+ const fileContent = fs.readFileSync(filePath, 'utf-8');
+ parsedFileContent = yaml.parse(fileContent);
+ }
+ slug = parsedFileContent.slug || slug;
+ return Object.assign(
+ {},
+ parsedFileContent,
+ {
+ path: articlePath,
+ filePath: pathWithinDocsDir,
+ slug
+ }
+ );
+ }));
+
+ return {
+ articles
+ }
+};
+
+const isMarkdownFile = (filePath: string) => filePath.endsWith('.md');
+
+const isYamlFile = (filePath: string) => filePath.endsWith('.yml');
+
+export default readSourceFiles;
diff --git a/scripts/build-index/index.js b/src/build-scripts/build-index/index.ts
similarity index 64%
rename from scripts/build-index/index.js
rename to src/build-scripts/build-index/index.ts
index 2c24644..7bda914 100644
--- a/scripts/build-index/index.js
+++ b/src/build-scripts/build-index/index.ts
@@ -1,6 +1,6 @@
-const readSourceFiles = require('./readSourceFiles');
-const indexArticles = require('./indexArticles');
-const saveArticlesIndex = require('./saveArticlesIndex');
+import readSourceFiles from './readSourceFiles';
+import indexArticles from './indexArticles';
+import saveArticlesIndex from './saveArticlesIndex';
const buildIndex = async () => {
try {
@@ -13,4 +13,4 @@ const buildIndex = async () => {
}
};
-module.exports = buildIndex;
+export default buildIndex;
diff --git a/src/build-scripts/build-index/indexArticles.ts b/src/build-scripts/build-index/indexArticles.ts
new file mode 100644
index 0000000..723abd1
--- /dev/null
+++ b/src/build-scripts/build-index/indexArticles.ts
@@ -0,0 +1,22 @@
+// @ts-ignore
+import lunr from 'lunr';
+
+type ParsedArticle = {
+ text: string;
+ path: string;
+}
+
+const indexArticles = (articles: ParsedArticle[]) => {
+ const index = lunr(function() {
+ this.ref('path');
+ this.field('text');
+
+ articles.forEach(function(article) {
+ this.add(article);
+ }, this);
+ });
+
+ return index;
+};
+
+export default indexArticles;
diff --git a/src/build-scripts/build-index/parseMarkdown.ts b/src/build-scripts/build-index/parseMarkdown.ts
new file mode 100644
index 0000000..fa5d451
--- /dev/null
+++ b/src/build-scripts/build-index/parseMarkdown.ts
@@ -0,0 +1,33 @@
+import unified from 'unified';
+// @ts-ignore
+import vfile from 'to-vfile';
+import parse from 'remark-parse';
+// @ts-ignore
+import extract from 'remark-extract-frontmatter';
+import frontmatter from 'remark-frontmatter';
+// @ts-ignore
+import strip from 'strip-markdown';
+import stringify from 'remark-stringify';
+import yaml from 'yaml';
+
+
+const parseMarkdown = async (filePath: string) => {
+ return await new Promise((resolve, reject) => {
+ unified()
+ .use(parse)
+ .use(frontmatter, ['yaml', 'toml'])
+ .use(extract, { yaml: yaml.parse })
+ .use(strip)
+ .use(stringify)
+ .process(vfile.readSync(filePath), function(err, file) {
+ if (err) {
+ reject(err);
+ } else {
+ const text = String(file);
+ resolve({ text });
+ }
+ });
+ });
+};
+
+export default parseMarkdown;
diff --git a/src/build-scripts/build-index/readSourceFiles.ts b/src/build-scripts/build-index/readSourceFiles.ts
new file mode 100644
index 0000000..d287764
--- /dev/null
+++ b/src/build-scripts/build-index/readSourceFiles.ts
@@ -0,0 +1,36 @@
+import globby from 'globby';
+
+import config from '../../../config';
+import parseMarkdown from './parseMarkdown';
+import {
+ stripFileExtensions
+ } from '../filePathHelpers';
+
+ const readSourceFiles = async () => {
+ const { docsPath } = config;
+ const filePatterns = [
+ `${docsPath}/**/*.md`
+ ];
+ const filePaths = await globby(filePatterns);
+
+ // FIXME: we will want to create different indices for different collections
+
+ const articles = await Promise.all(filePaths.map(async (filePath) => {
+ const pathWithinDocsDir = filePath.substring(docsPath.length + 1);
+ const articlePath = stripFileExtensions(pathWithinDocsDir);
+ const parsedFileContent = await parseMarkdown(filePath) as { text: string };
+ return Object.assign(
+ {},
+ parsedFileContent,
+ {
+ path: articlePath
+ }
+ );
+ }));
+
+ return {
+ articles
+ };
+};
+
+export default readSourceFiles;
diff --git a/src/build-scripts/build-index/saveArticlesIndex.ts b/src/build-scripts/build-index/saveArticlesIndex.ts
new file mode 100644
index 0000000..a507c80
--- /dev/null
+++ b/src/build-scripts/build-index/saveArticlesIndex.ts
@@ -0,0 +1,13 @@
+import fs from 'fs';
+// @ts-ignore
+import mkdirp from 'mkdirp';
+
+import config from '../../../config';
+
+const saveArticlesIndex = async (index: Object) => {
+ await mkdirp(config.indexDirectory);
+ fs.writeFileSync(config.articlesIndexPath, JSON.stringify(index));
+ console.log('Index file generated successfully');
+};
+
+export default saveArticlesIndex;
diff --git a/src/build-scripts/copy-assets/index.ts b/src/build-scripts/copy-assets/index.ts
new file mode 100644
index 0000000..77582ff
--- /dev/null
+++ b/src/build-scripts/copy-assets/index.ts
@@ -0,0 +1,28 @@
+import fs from 'fs-extra';
+import path from 'path';
+import globby from 'globby';
+
+import config from '../../../config';
+
+const copyAssets = async () => {
+ const { docsPath, buildImagesPath } = config;
+ const extensions = [
+ 'gif',
+ 'jpg',
+ 'jpeg',
+ 'png',
+ 'pdf'
+ ];
+
+ const patterns = extensions.map(ext => `${docsPath}/**/*.${ext}`);
+ const filePaths = await globby(patterns);
+ filePaths.forEach((filePath) => {
+ const internalPath = filePath.substr(docsPath.length + 1);
+ const destinationPath = path.resolve(buildImagesPath, internalPath);
+ fs.copySync(filePath, destinationPath);
+ });
+
+ console.log('Static assets copied successfully');
+};
+
+export default copyAssets;
diff --git a/src/build-scripts/filePathHelpers.ts b/src/build-scripts/filePathHelpers.ts
new file mode 100644
index 0000000..8329d04
--- /dev/null
+++ b/src/build-scripts/filePathHelpers.ts
@@ -0,0 +1,45 @@
+import path from 'path';
+import { kebabCase } from 'lodash';
+
+import config from '../../config';
+
+import { Relation } from '../types/Relation';
+
+// Transform file path into a slug (hyphen-separates string)
+export const slugifyPath = (filePath: string) => {
+ const withoutExtensions = stripFileExtensions(filePath);
+ const withoutSlashes = withoutExtensions.replace('/', '-');
+ return kebabCase(withoutSlashes);
+};
+
+export const stripFileExtensions = (filePath: string) => {
+ return filePath.split('.').shift();
+};
+
+type BuildPathToRelatedItemParams = {
+ sourceFilePath: string;
+ relation: Relation;
+ returnAbsolutePath?: boolean
+};
+
+// transforms absolute file path to the path relative to the documents root
+export const fromDocumentsRoot = (absFilePath: string) => {
+ const [_, filePath] = absFilePath.split(config.docsPath);
+ return filePath;
+};
+
+export const buildPathToRelatedItem = (params: BuildPathToRelatedItemParams) => {
+ const { sourceFilePath, relation, returnAbsolutePath } = params;
+ let relationPath;
+ if ('docsRootPath' in relation) {
+ relationPath = relation.docsRootPath;
+ } else if ('relativePath' in relation) {
+ const currentDirPath = sourceFilePath.split('/').slice(0, -1).join('/');
+ relationPath = path.join(currentDirPath, relation.relativePath);
+ }
+ if (returnAbsolutePath) {
+ return path.join(config.docsPath, relationPath);
+ } else {
+ return relationPath;
+ }
+};
diff --git a/src/build-scripts/index.ts b/src/build-scripts/index.ts
new file mode 100644
index 0000000..f2f257c
--- /dev/null
+++ b/src/build-scripts/index.ts
@@ -0,0 +1,23 @@
+import buildDatabase from './build-database';
+import buildIndex from './build-index';
+import copyAssets from './/copy-assets';
+
+const build = async () => {
+ try {
+ await buildDatabase();
+ await buildIndex();
+ await copyAssets();
+ } catch (error) {
+ console.error('Error building the project', error);
+ }
+};
+
+(async () => {
+ try {
+ await build();
+ process.exit(0);
+ } catch (error) {
+ console.log(error);
+ process.exit(1);
+ }
+})();
diff --git a/src/controllers/articlesController.ts b/src/controllers/articlesController.ts
new file mode 100644
index 0000000..c3c0211
--- /dev/null
+++ b/src/controllers/articlesController.ts
@@ -0,0 +1,58 @@
+import { Request, Response } from 'express';
+
+import { Article, Video } from '../models';
+
+export const getArticle = async (req: Request, res: Response) => {
+ const slug = req.query.slug as string | undefined;
+ const filePath = req.query.path as string | undefined;
+ if (!filePath && !slug) {
+ res.status(400);
+ return res.json({
+ error: 'Path and slug parameters cannot both be empty'
+ });
+ }
+
+ try {
+ const searchKey = slug ? 'slug' : 'path';
+ const searchValue = slug ? slug : filePath as string;
+
+ const article: Article | null = await Article.findOne({
+ where: { [searchKey]: searchValue },
+ include: [
+ {
+ model: Video,
+ as: 'videos',
+ attributes: [ 'id', 'title', 'description', 'url' ]
+ },
+ {
+ model: Article,
+ as: 'relatedArticles',
+ attributes: [ 'id', 'title', 'slug', 'path' ],
+ through: { attributes: [] }
+ }
+ ]
+ });
+
+ if (article) {
+ res.json({
+ path: article.path,
+ slug: article.slug,
+ body: article.body,
+ related_articles: article.relatedArticles,
+ videos: article.videos
+ // data: match.data
+ });
+ } else {
+ res.status(404);
+ res.json({
+ error: `Article not found`
+ });
+ }
+ } catch (error) {
+ console.log('error', error);
+ res.status(500);
+ res.json({
+ error: 'There was an error processing your request'
+ });
+ }
+};
diff --git a/src/controllers/collectionsController.ts b/src/controllers/collectionsController.ts
new file mode 100644
index 0000000..5489b71
--- /dev/null
+++ b/src/controllers/collectionsController.ts
@@ -0,0 +1,27 @@
+import { Request, Response } from 'express';
+
+import { Collection } from '../models';
+
+export const getCollection = async (req: Request, res: Response) => {
+ const name = req.query.name as string | undefined;
+
+ try {
+ const collection: Collection = await Collection.findOne({ where: { name } });
+
+ if (collection) {
+ const articles = await collection.getArticles();
+ res.json(articles);
+ } else {
+ res.status(404);
+ res.json({
+ error: `Article not found`
+ });
+ }
+ } catch (error) {
+ console.log('error', error);
+ res.status(500);
+ res.json({
+ error: 'There was an error processing your request'
+ });
+ }
+};
diff --git a/src/controllers/healthcheckController.ts b/src/controllers/healthcheckController.ts
new file mode 100644
index 0000000..67cecc2
--- /dev/null
+++ b/src/controllers/healthcheckController.ts
@@ -0,0 +1,7 @@
+import { Request, Response } from 'express';
+
+export const healthcheck = (request: Request, response: Response) => {
+ response.json({
+ message: 'Doing fine'
+ });
+};
diff --git a/src/controllers/menusController.ts b/src/controllers/menusController.ts
new file mode 100644
index 0000000..73eb056
--- /dev/null
+++ b/src/controllers/menusController.ts
@@ -0,0 +1,37 @@
+import { Request, Response } from 'express';
+
+import { Menu } from '../models';
+
+export const getMenu = async (req: Request, res: Response) => {
+ const name = req.query.name as string | undefined;
+
+ if (!name) {
+ res.status(400);
+ return res.json({
+ error: 'Name query parameter cannot be empty'
+ });
+ }
+
+ try {
+ const menu: Menu | null = await Menu.findOne({ where: { name } });
+
+ if (menu) {
+ res.json({
+ name: menu.name,
+ data: JSON.parse(menu.data),
+ });
+ } else {
+ res.status(404);
+ res.json({
+ error: `Menu not found`
+ });
+ }
+ } catch (error) {
+ res.status(500);
+ console.log('error', error);
+ res.json({
+ error: 'There was an error processing your request'
+ });
+ }
+
+};
diff --git a/src/controllers/searchController.ts b/src/controllers/searchController.ts
new file mode 100644
index 0000000..1f6b276
--- /dev/null
+++ b/src/controllers/searchController.ts
@@ -0,0 +1,42 @@
+import { Request, Response } from 'express';
+// @ts-ignore
+import lunr from 'lunr';
+
+import config from '../../config';
+import { Article } from '../models';
+
+const articlesIndexPath = config.articlesIndexPath;
+const articlesIndex = require(articlesIndexPath);
+
+export const search = async (req: Request, res: Response) => {
+ const query = req.query.query as string | undefined;
+ if (!query) {
+ res.status(400);
+ return res.json({
+ error: 'Query parameter cannot be empty'
+ });
+ }
+
+ const searchResults = searchIndex(query, articlesIndex);
+
+ try {
+ const paths: string[] = searchResults.map((result: any) => result.ref);
+ const articles = await Promise.all(
+ paths.map(path => Article.findOne({ where: { path } }))
+ );
+
+ res.json(articles);
+ } catch (error) {
+ res.status(404);
+ res.json({
+ error,
+ searchResults
+ })
+ }
+};
+
+const searchIndex = (query: string, index: string) => {
+ const idx = lunr.Index.load(index);
+ return idx.search(query);
+};
+
diff --git a/src/db/prepareDatabase.ts b/src/db/prepareDatabase.ts
new file mode 100644
index 0000000..abb743b
--- /dev/null
+++ b/src/db/prepareDatabase.ts
@@ -0,0 +1,10 @@
+// make sure tables are created in the db
+
+import * as models from '../models';
+import sequelize from './sequelize';
+
+const prepareDatabase = async () => {
+ await sequelize.sync();
+}
+
+export default prepareDatabase;
diff --git a/src/db/sequelize.ts b/src/db/sequelize.ts
new file mode 100644
index 0000000..824badd
--- /dev/null
+++ b/src/db/sequelize.ts
@@ -0,0 +1,20 @@
+import sqlite from 'sqlite3';
+import { Sequelize } from 'sequelize';
+
+import config from '../../config';
+
+const shouldLog = !config.isProduction && !config.isBuildingDocs;
+
+if (shouldLog) {
+ sqlite.verbose();
+}
+
+new sqlite.Database(config.databasePath);
+
+const sequelize = new Sequelize({
+ dialect: 'sqlite',
+ storage: config.databasePath,
+ logging: shouldLog && console.log
+});
+
+export default sequelize;
diff --git a/src/models/Article.ts b/src/models/Article.ts
new file mode 100644
index 0000000..5e32000
--- /dev/null
+++ b/src/models/Article.ts
@@ -0,0 +1,93 @@
+import {
+ Model,
+ Association,
+ HasManyAddAssociationMixin,
+ HasManyGetAssociationsMixin,
+ HasManyHasAssociationMixin,
+ DataTypes
+} from 'sequelize';
+
+import sequelize from '../db/sequelize';
+import Video from './Video';
+
+class Article extends Model {
+ public id: number;
+ public title: string;
+ public description: string;
+ public path: string;
+ public file_path: string;
+ public slug: string;
+ public body: string;
+ public data: string;
+
+ public readonly createdAt: Date;
+ public readonly updatedAt: Date;
+
+
+ public addVideo: HasManyAddAssociationMixin<Video, number>;
+ public getVideos: HasManyGetAssociationsMixin<Video>;
+ public hasVideos: HasManyHasAssociationMixin<Video, number>;
+
+ public addRelatedArticle: HasManyAddAssociationMixin<Article, number>;
+ public getRelatedArticles: HasManyGetAssociationsMixin<Article>;
+ public hasRelatedArticles: HasManyHasAssociationMixin<Article, number>;
+
+ public readonly relatedArticles?: Article[];
+ public readonly videos?: Video[];
+
+ public static associations: {
+ projects: Association<Article, Video>;
+ };
+
+}
+
+Article.init({
+ id: {
+ type: DataTypes.INTEGER,
+ autoIncrement: true,
+ primaryKey: true,
+ },
+ title: {
+ type: new DataTypes.STRING(255),
+ allowNull: false,
+ },
+ description: {
+ type: new DataTypes.TEXT,
+ allowNull: false,
+ },
+ path: {
+ type: new DataTypes.STRING(255),
+ allowNull: false,
+ },
+ file_path: {
+ type: new DataTypes.STRING(255),
+ allowNull: true
+ },
+ slug: {
+ type: new DataTypes.STRING(255),
+ allowNull: true
+ },
+ body: {
+ type: new DataTypes.TEXT,
+ allowNull: true
+ },
+ data: {
+ type: new DataTypes.TEXT,
+ allowNull: true
+ }
+}, {
+ tableName: 'articles',
+ sequelize
+});
+
+Article.belongsToMany(Article, {
+ as: 'relatedArticles',
+ through: 'article_relationships'
+});
+
+Article.hasMany(Video, {
+ foreignKey: 'articleId',
+ as: 'videos'
+});
+
+export default Article;
diff --git a/src/models/Collection.ts b/src/models/Collection.ts
new file mode 100644
index 0000000..4adaab1
--- /dev/null
+++ b/src/models/Collection.ts
@@ -0,0 +1,42 @@
+import {
+ Model,
+ DataTypes,
+ HasManyAddAssociationMixin,
+ HasManyGetAssociationsMixin
+} from 'sequelize';
+
+import sequelize from '../db/sequelize';
+import Article from './Article';
+
+class Collection extends Model {
+ public id: number;
+ public name: string;
+
+ public readonly createdAt: Date;
+ public readonly updatedAt: Date;
+
+ public addArticle: HasManyAddAssociationMixin<Article, number>;
+ public getArticles: HasManyGetAssociationsMixin<Article>;
+}
+
+Collection.init({
+ id: {
+ type: DataTypes.INTEGER,
+ autoIncrement: true,
+ primaryKey: true,
+ },
+ name: {
+ type: new DataTypes.STRING(255),
+ allowNull: false,
+ }
+}, {
+ tableName: 'collections',
+ sequelize
+});
+
+Collection.hasMany(Article, {
+ foreignKey: 'collectionId',
+ as: 'articles'
+});
+
+export default Collection;
diff --git a/src/models/Menu.ts b/src/models/Menu.ts
new file mode 100644
index 0000000..2092f19
--- /dev/null
+++ b/src/models/Menu.ts
@@ -0,0 +1,33 @@
+import {
+ Model,
+ DataTypes
+} from 'sequelize';
+
+import sequelize from '../db/sequelize';
+
+class Menu extends Model {
+ public id: number;
+ public name: string;
+ public data: string;
+}
+
+Menu.init({
+ id: {
+ type: DataTypes.INTEGER,
+ autoIncrement: true,
+ primaryKey: true,
+ },
+ name: {
+ type: new DataTypes.STRING(255),
+ allowNull: false,
+ },
+ data: {
+ type: new DataTypes.TEXT,
+ allowNull: false
+ }
+}, {
+ tableName: 'menus',
+ sequelize
+});
+
+export default Menu;
diff --git a/src/models/Video.ts b/src/models/Video.ts
new file mode 100644
index 0000000..270f1d1
--- /dev/null
+++ b/src/models/Video.ts
@@ -0,0 +1,48 @@
+import { Model, DataTypes } from 'sequelize';
+
+import sequelize from '../db/sequelize';
+
+export class Video extends Model {
+ public id: number;
+ public file_path: string;
+ public title: string;
+ public description: string;
+ public url: string;
+ public data: string;
+
+ public readonly createdAt: Date;
+ public readonly updatedAt: Date;
+}
+
+Video.init({
+ id: {
+ type: DataTypes.INTEGER,
+ autoIncrement: true,
+ primaryKey: true,
+ },
+ file_path: {
+ type: new DataTypes.STRING(255),
+ allowNull: false,
+ },
+ title: {
+ type: new DataTypes.STRING(255),
+ allowNull: true
+ },
+ description: {
+ type: new DataTypes.TEXT,
+ allowNull: true
+ },
+ url: {
+ type: new DataTypes.STRING(255),
+ allowNull: true
+ },
+ data: {
+ type: new DataTypes.TEXT,
+ allowNull: true
+ }
+}, {
+ tableName: 'videos',
+ sequelize
+});
+
+export default Video;
diff --git a/src/models/index.ts b/src/models/index.ts
new file mode 100644
index 0000000..4befeee
--- /dev/null
+++ b/src/models/index.ts
@@ -0,0 +1,4 @@
+export { default as Article } from './Article';
+export { default as Video } from './Video';
+export { default as Menu } from './Menu';
+export { default as Collection } from './Collection';
diff --git a/src/server/app.ts b/src/server/app.ts
new file mode 100644
index 0000000..de2acbe
--- /dev/null
+++ b/src/server/app.ts
@@ -0,0 +1,24 @@
+import express from 'express';
+import cors from 'cors';
+const app = express();
+
+import config from '../../config';
+
+app.use(cors());
+app.disable('x-powered-by');
+
+import { getArticle } from '../controllers/articlesController';
+import { getCollection } from '../controllers/collectionsController';
+import { getMenu } from '../controllers/menusController';
+import { search } from '../controllers/searchController';
+import { healthcheck } from '../controllers/healthcheckController';
+
+app.use('/images', express.static(config.buildImagesPath));
+
+app.use('/api/article', getArticle);
+app.use('/api/collection', getCollection);
+app.use('/api/menus', getMenu);
+app.use('/api/search', search);
+app.use('/api/healthcheck', healthcheck);
+
+export default app;
diff --git a/src/server/index.ts b/src/server/index.ts
new file mode 100644
index 0000000..7ce0b40
--- /dev/null
+++ b/src/server/index.ts
@@ -0,0 +1,7 @@
+import app from './app';
+
+const port = 3000;
+
+app.listen(port, () => {
+ console.log(`Listening at http://localhost:${port}`)
+});
diff --git a/src/types/ParsedArticle.ts b/src/types/ParsedArticle.ts
new file mode 100644
index 0000000..179f3bf
--- /dev/null
+++ b/src/types/ParsedArticle.ts
@@ -0,0 +1,13 @@
+import { Relation } from './Relation';
+
+export type ParsedArticle = {
+ title: string;
+ description: string;
+ path: string;
+ filePath: string;
+ slug: string;
+ html: string;
+ status: string;
+ related_articles?: Relation[];
+ related_videos?: Relation[];
+};
diff --git a/src/types/ParsedMenu.ts b/src/types/ParsedMenu.ts
new file mode 100644
index 0000000..7932200
--- /dev/null
+++ b/src/types/ParsedMenu.ts
@@ -0,0 +1,7 @@
+export type MenuItem = {
+ name: string;
+ href: string;
+ path: string;
+ items?: MenuItem[]
+};
+
diff --git a/src/types/ParsedVideo.ts b/src/types/ParsedVideo.ts
new file mode 100644
index 0000000..fd00e19
--- /dev/null
+++ b/src/types/ParsedVideo.ts
@@ -0,0 +1,6 @@
+export type ParsedVideo = {
+ title: string;
+ description: string;
+ url: string;
+ filePath: string;
+}
diff --git a/src/types/Relation.ts b/src/types/Relation.ts
new file mode 100644
index 0000000..99028d8
--- /dev/null
+++ b/src/types/Relation.ts
@@ -0,0 +1,16 @@
+type RelativePathRelation = {
+ relativePath: string;
+};
+
+type RootPathRelation = {
+ docsRootPath: string;
+};
+
+type SlugRelation = {
+ slug: string;
+};
+
+export type Relation =
+ | RelativePathRelation
+ | RootPathRelation
+ | SlugRelation;
diff --git a/tsconfig.json b/tsconfig.json
new file mode 100644
index 0000000..5778e90
--- /dev/null
+++ b/tsconfig.json
@@ -0,0 +1,27 @@
+{
+ "compilerOptions": {
+ "module": "commonjs",
+ "esModuleInterop": true,
+ "allowSyntheticDefaultImports": true,
+ "experimentalDecorators": true,
+ "emitDecoratorMetadata": true,
+ "target": "es6",
+ "noImplicitAny": true,
+ "moduleResolution": "node",
+ "sourceMap": true,
+ "outDir": "build",
+ "baseUrl": ".",
+ "paths": {
+ "src/*": [
+ "src/*"
+ ],
+ "*": [
+ "node_modules/*",
+ "src/types/*"
+ ]
+ }
+ },
+ "include": [
+ "src/**/*"
+ ]
+}
--
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