Commits · master · eQTL / eQTL-SumStats

This project is mirrored from https://github.com/eQTL-Catalogue/eQTL-SumStats.git. Pull mirroring updated Aug 09, 2020.

26 Jun, 2020 1 commit
- Create check_tabix_list_against_ftp.sh · 0b3376dd
  jdhayhurst authored Jun 26, 2020
  
  0b3376dd
29 May, 2020 9 commits
- Merge pull request #9 from eQTL-Catalogue/dev · 7b290f2a
  jdhayhurst authored May 29, 2020
```
update pvc storage class name
```
  7b290f2a
- update pvc storage class name · 0c5db10f
  jdhayhurst authored May 29, 2020
  
  0c5db10f
- Merge pull request #8 from eQTL-Catalogue/dev · 68b0bccd
  jdhayhurst authored May 29, 2020
```
show none for se if not present
```
  68b0bccd
- show none for se if not present · 0a23b5bd
  jdhayhurst authored May 29, 2020
  
  0a23b5bd
- Merge pull request #7 from eQTL-Catalogue/dev · 61d4ca27
  jdhayhurst authored May 29, 2020
```
show none for se if not present
```
  61d4ca27
- show none for se if not present · e32fd156
  jdhayhurst authored May 29, 2020
  
  e32fd156
- Merge pull request #6 from eQTL-Catalogue/dev · 98a043a2
  jdhayhurst authored May 29, 2020
```
Dev
```
  98a043a2
- display se, fix logging path, update PVC storage class name · 050a03c5
  jdhayhurst authored May 29, 2020
  
  050a03c5
- Merge branch 'master' of https://github.com/eQTL-Catalogue/eQTL-SumStats into dev · 5ce6d62d
  jdhayhurst authored May 29, 2020
  
  5ce6d62d
01 May, 2020 3 commits
- considation of hdf · c6414c2c
  jdhayhurst authored May 01, 2020
  
  c6414c2c
- Merge pull request #5 from eQTL-Catalogue/dev · 94f7eab5
  jdhayhurst authored May 01, 2020
```
variant searcher added where missing from some association endpoints
```
  94f7eab5
- variant searcher added where missing from some association endpoints · 09ae1c7f
  jdhayhurst authored May 01, 2020
  
  09ae1c7f
30 Apr, 2020 5 commits
- Merge pull request #4 from eQTL-Catalogue/dev · 32c3f640
  jdhayhurst authored Apr 30, 2020
```
sqlite client patch to accomodate schema change
```
  32c3f640
- sqlite client patch to accomodate schema change · 4489f4f5
  jdhayhurst authored Apr 30, 2020
  
  4489f4f5
- Update explorer.py · 091348d5
  jdhayhurst authored Apr 30, 2020
  
  091348d5
- Merge pull request #3 from eQTL-Catalogue/dev · d7064ff4
  jdhayhurst authored Apr 30, 2020
```
Dev
```
  d7064ff4
- chromosome from int to string, snp table loader optimisation · de4b5a42
  jdhayhurst authored Apr 30, 2020
  
  de4b5a42
28 Apr, 2020 3 commits
- pvalue dtype · 7ff73cc1
  jdhayhurst authored Apr 28, 2020
  
  7ff73cc1
- int to int64 dtypes · 9e6677dc
  jdhayhurst authored Apr 28, 2020
  
  9e6677dc
- pvalue dtype · 22f81bdc
  jdhayhurst authored Apr 28, 2020
  
  22f81bdc
23 Apr, 2020 4 commits
- hdf in append mode · 25225755
  jdhayhurst authored Apr 23, 2020
  
  25225755
- hdf in append mode · 0fcb4528
  jdhayhurst authored Apr 23, 2020
  
  0fcb4528
- hdf in append mode · 6821b51d
  jdhayhurst authored Apr 23, 2020
  
  6821b51d
- chromosome --> str · 8478e842
  jdhayhurst authored Apr 23, 2020
  
  8478e842
22 Apr, 2020 1 commit
- update loader to take SE and not perform merge · 1b4f5bcf
  jdhayhurst authored Apr 22, 2020
  
  1b4f5bcf
14 Apr, 2020 1 commit
- Create merge_rsid_from_vcf.py · f304f0d5
  jdhayhurst authored Apr 14, 2020
  
  f304f0d5
02 Mar, 2020 10 commits
- Merge pull request #2 from eQTL-Catalogue/dev · 9d7d51d5
  jdhayhurst authored Mar 02, 2020
```
Dev
```
  9d7d51d5
- new trait implementation test · f26d9ea2
  jdhayhurst authored Mar 02, 2020
  
  f26d9ea2
- new trait implementation test · 3ccbdae5
  jdhayhurst authored Mar 02, 2020
  
  3ccbdae5
- new trait implementation test · b97812ec
  jdhayhurst authored Mar 02, 2020
  
  b97812ec
- new trait implementation test · 257a257c
  jdhayhurst authored Mar 02, 2020
  
  257a257c
- new trait implementation test · d337b1f7
  jdhayhurst authored Mar 02, 2020
  
  d337b1f7
- new trait implementation test · 77327656
  jdhayhurst authored Mar 02, 2020
  
  77327656
- new trait implementation test · eee66f33
  jdhayhurst authored Mar 02, 2020
  
  eee66f33
- new trait implementation test · ced58eb6
  jdhayhurst authored Mar 02, 2020
  
  ced58eb6
- new trait implementation test · 90b20232
  jdhayhurst authored Mar 02, 2020
  
  90b20232
28 Feb, 2020 2 commits
- enable indexing of trait meta data · d6ad3cc0
  jdhayhurst authored Feb 28, 2020
  
  d6ad3cc0
- remove double lookup of trait/gene position · 1e0fe275
  jdhayhurst authored Feb 28, 2020
  
  1e0fe275
06 Feb, 2020 1 commit
- adding link info to docs · 53400bbb
  jdhayhurst authored Feb 06, 2020
  
  53400bbb