Commit fd9307b5 authored by Evangelia Petsalaki's avatar Evangelia Petsalaki
Browse files

Initial commit

parents
To run simply type:
./wrapperInteractomeCleannew.pl 20180426_stable_orbitrap
or any of the files starting with 20180426 and without the .data at the end
#!/usr/bin/perl
open (IN,"$ARGV[0]")||die;
while(<IN>)
{
chomp;
if ($_=~/Sample Name/)
{
next;
}
@a=split/\t/;
$sample=$a[1];
$prot=$a[5];
$mascot=$a[8];
$data{$sample}.=$prot."\t".$mascot."\n";
}
close IN;
%decoysall=0;
%otherall=0;
foreach $s (keys %data)
{
@hits=split(/\n/,$data{$s});
for($co=25;$co<=50;$co+=5)
{
$dec=0;
$oth=0;
foreach $a (@hits)
{
@tmp=split(/\t/,$a);
if ($tmp[1]>=$co)
{
if ($tmp[0]=~/DECOY/)
{
$dec++;
$decoysall{$co}++;
}
else
{
$oth++;
$otherall{$co}++;
}
}
}
$fdr=0;
if ($dec+$oth==0)
{
$fdr='NA';
}
else
{
$fdr=$dec/($dec+$oth);
}
$det{$s}[$co]=$fdr;
}
}
open (OUT,">$ARGV[0].fdr")||die;
print OUT "sample\t25\t30\t35\t40\t45\t50\n";
foreach $s(keys %det)
{
print OUT $s,"\t";
for($co=25;$co<=50;$co+=5)
{
print OUT $det{$s}[$co],"\t";
}
print OUT "\n";
}
close OUT;
#!/usr/bin/perl
open (IN,"$ARGV[1].carryover")||die; #carry overfile
while(<IN>)
{
chomp;
@a=split/\t/;
$carryover{$a[0]}=1;
}
close IN;
open (IN,"$ARGV[0].data")||die; #datafile
while(<IN>)
{
chomp;
@a1=split/\t/;
$a=$a1[1]."-".$a1[4];
if ($carryover{$a}==1)
{
next;
}
else
{
print $_,"\n";
}
}
close IN;
46.8 ACTG1 NP_001186883;NP_001605 ACTG_HUMAN 46.8 30
46.8 ACTB NP_001092 ACTB_HUMAN 46.8 30
38.31 KRT1 NP_006112 K2C1_HUMAN 38.31 29
37.23 KIF11 NP_004514 KIF11_HUMAN 37.23 13
33.88 PRMT5 NP_001034708;NP_006100 ANM5_HUMAN 33.88 24
31.0 MDC1 NP_055456 MDC1_HUMAN 31.0 2
25.5 ACTC1 NP_005150 ACTC_HUMAN 25.5 28
25.46 ACTA1 NP_001091 ACTS_HUMAN 25.46 28
24.26 ACTA2 NP_001135417;NP_001604 ACTA_HUMAN 24.26 27
24.22 ACTG2 NP_001186822;NP_001606 ACTH_HUMAN 24.22 27
23.85 VIM NP_003371 VIME_HUMAN 23.85 20
23.28 KRT10 NP_000412 K1C10_HUMAN 23.28 29
21.5 MYO1B NP_001123630;NP_001155291 MYO1B_HUMAN 21.5 4
20.75 GSTP1 NP_000843 GSTP1_HUMAN 20.75 4
20.32 FLNA NP_001104026;NP_001447 FLNA_HUMAN 20.32 22
20.0 TOP2A NP_001058 TOP2A_HUMAN 20.0 3
20.0 ATXN2L NP_009176;NP_663760 ATX2L_HUMAN 20.0 1
19.33 RAD50 NP_005723 RAD50_HUMAN 19.33 3
19.22 KRT2 NP_000414 K22E_HUMAN 19.22 27
19.17 ACTN4 NP_004915 ACTN4_HUMAN 19.17 6
19.07 HIST1H1E NP_005312 H14_HUMAN 19.07 27
18.67 CBR1 NP_001748 CBR1_HUMAN 18.67 3
18.48 HIST1H1C NP_005310 H12_HUMAN 18.48 27
18.08 HIST1H1D NP_005311 H13_HUMAN 18.08 26
17.91 STK38 NP_009202 STK38_HUMAN 17.91 23
17.7 KRT9 NP_000217 K1C9_HUMAN 17.7 27
17.5 PPM1B NP_001028728;NP_001028729 PPM1B_HUMAN 17.5 22
17.29 HIST2H2BF NP_001019770;NP_001154806 H2B2F_HUMAN 17.29 24
17.29 HIST1H2BN NP_003511 H2B1N_HUMAN 17.29 24
17.29 HIST1H2BM NP_003512 H2B1M_HUMAN 17.29 24
17.29 HIST1H2BI NP_003509;NP_003513 H2B1C_HUMAN 17.29 24
17.29 HIST1H2BH NP_003515 H2B1H_HUMAN 17.29 24
17.29 HIST1H2BG NP_003509;NP_003513 H2B1J_HUMAN 17.29 24
17.29 HIST1H2BF NP_003509;NP_003513 H2B1C_HUMAN 17.29 24
17.29 HIST1H2BE NP_003509;NP_003513 H2B1C_HUMAN 17.29 24
17.29 HIST1H2BD NP_066407;NP_619790 H2B1D_HUMAN 17.29 24
17.29 HIST1H2BC NP_003509;NP_003513 H2B1C_HUMAN 17.29 24
17.24 gi|134133226|ref|NP_001077007.1| NP_001077007.1 -- 17.24 29
17.17 HIST1H2BL NP_003510 H2B1L_HUMAN 17.17 24
17.17 HIST1H2BK NP_542160 H2B1K_HUMAN;H2BFS_HUMAN 17.17 24
16.88 HIST2H2BE NP_003519 H2B2E_HUMAN 16.88 24
16.88 HIST1H2BO NP_003518 H2B1O_HUMAN 16.88 24
16.88 HIST1H2BB NP_066406 H2B1B_HUMAN 16.88 24
16.75 HIST1H2BJ NP_066402 H2B1C_HUMAN 16.75 24
16.58 HIST3H2BB NP_778225 H2B3B_HUMAN 16.58 24
16.15 RPL6 NP_000961;NP_001019833 RL6_HUMAN 16.15 13
16.08 HNRNPM NP_005959;NP_112480 HNRPM_HUMAN 16.08 25
15.77 HIST4H4 NP_001029249;NP_003486 H4_HUMAN 15.77 22
15.77 HIST2H4B NP_001029249;NP_003486 H4_HUMAN 15.77 22
15.77 HIST2H4A NP_001029249;NP_003486 H4_HUMAN 15.77 22
15.77 HIST1H4L NP_001029249;NP_003486 H4_HUMAN 15.77 22
15.77 HIST1H4K NP_001029249;NP_003486 H4_HUMAN 15.77 22
15.77 HIST1H4J NP_001029249;NP_003486 H4_HUMAN 15.77 22
15.77 HIST1H4I NP_001029249;NP_003486 H4_HUMAN 15.77 22
15.77 HIST1H4H NP_001029249;NP_003486 H4_HUMAN 15.77 22
15.77 HIST1H4F NP_001029249;NP_003486 H4_HUMAN 15.77 22
15.77 HIST1H4E NP_001029249;NP_003486 H4_HUMAN 15.77 22
15.77 HIST1H4D NP_001029249;NP_003486 H4_HUMAN 15.77 22
15.77 HIST1H4C NP_001029249;NP_003486 H4_HUMAN 15.77 22
15.77 HIST1H4B NP_001029249;NP_003486 H4_HUMAN 15.77 22
15.77 HIST1H4A NP_001029249;NP_003486 H4_HUMAN 15.77 22
15.46 WDR77 NP_077007 MEP50_HUMAN 15.46 24
15.0 SVIL NP_003165;NP_068506 SVIL_HUMAN 15.0 1
14.77 TUBA1B NP_006073 TBA1B_HUMAN 14.77 26
14.46 TUBB NP_821133 TBB5_HUMAN 14.46 28
14.38 TUBA1C NP_116093 TBA1C_HUMAN 14.38 26
14.33 HIST2H2AC NP_003508 H2A2C_HUMAN 14.33 24
14.33 HIST2H2AA4 NP_001035807;NP_003507 H2A2A_HUMAN 14.33 24
14.33 HIST2H2AA3 NP_001035807;NP_003507 H2A2A_HUMAN 14.33 24
14.25 HIST1H2AM NP_003500;NP_003501 H2A1_HUMAN 14.25 24
14.25 HIST1H2AL NP_003500;NP_003501 H2A1_HUMAN 14.25 24
14.25 HIST1H2AK NP_003500;NP_003501 H2A1_HUMAN 14.25 24
14.25 HIST1H2AJ NP_066544 H2A1J_HUMAN 14.25 24
14.25 HIST1H2AI NP_003500;NP_003501 H2A1_HUMAN 14.25 24
14.25 HIST1H2AH NP_542163 H2A1H_HUMAN 14.25 24
14.25 HIST1H2AG NP_003500;NP_003501 H2A1_HUMAN 14.25 24
14.25 H2AFJ NP_808760 H2AJ_HUMAN 14.25 24
14.18 DHX9 NP_001348 DHX9_HUMAN 14.18 17
14.13 RBM10 NP_001191395;NP_001191396 RBM10_HUMAN 14.13 24
13.88 TUBA1A NP_006000 TBA1A_HUMAN 13.88 26
13.79 HIST1H2AD NP_066409 H2A1D_HUMAN 13.79 24
13.79 HIST1H2AC NP_003503 H2A1C_HUMAN 13.79 24
13.6 CALM3 NP_001734;NP_005175 CALM_HUMAN 13.6 10
13.6 CALM2 NP_001734;NP_005175 CALM_HUMAN 13.6 10
13.6 CALM1 NP_001734;NP_005175 CALM_HUMAN 13.6 10
13.5 BASP1 NP_006308 BASP1_HUMAN 13.5 2
13.33 HIST3H2A NP_254280 H2A3_HUMAN 13.33 24
13.33 HIST1H2AE NP_003504;NP_066390 H2A1B_HUMAN 13.33 24
13.33 HIST1H2AB NP_003504;NP_066390 H2A1B_HUMAN 13.33 24
12.96 TUBB2C NP_006079 TBB2C_HUMAN 12.96 27
12.93 NCL NP_005372 NUCL_HUMAN 12.93 29
12.9 HSPA1B NP_005336;NP_005337 HSP71_HUMAN 12.9 30
12.9 HSPA1A NP_005336;NP_005337 HSP71_HUMAN 12.9 30
12.64 PRPS1 NP_001191331;NP_002755 PRPS1_HUMAN 12.64 11
12.45 RPLP2 NP_000995 RLA2_HUMAN 12.45 22
12.3 TUBA3D NP_005992;NP_525125 TBA3C_HUMAN 12.3 23
12.3 TUBA3C NP_005992;NP_525125 TBA3C_HUMAN 12.3 23
12.21 NPM1 NP_001032827;NP_002511 NPM_HUMAN 12.21 29
12.2 G3BP1 NP_005745;NP_938405 G3BP1_HUMAN 12.2 5
12.17 NONO NP_001138880;NP_001138881 NONO_HUMAN 12.17 18
12.13 MYH9 NP_002464 MYH9_HUMAN 12.13 15
12.08 HNRNPA2B1 NP_002128;NP_112533 ROA2_HUMAN 12.08 25
12.0 MKI67 NP_001139438;NP_002408 KI67_HUMAN 12.0 2
11.95 TUBA4A NP_005991 TBA4A_HUMAN 11.95 21
11.67 SFPQ NP_005057 SFPQ_HUMAN 11.67 18
11.05 KRT14 NP_000517 K1C14_HUMAN 11.05 20
11.0 LRPPRC NP_573566 LPPRC_HUMAN 11.0 8
10.96 TUBA3E NP_997195 TBA3E_HUMAN 10.96 23
10.9 RPL13A NP_036555 RL13A_HUMAN 10.9 10
10.81 ACTBL2 NP_001017992 ACTBL_HUMAN 10.81 27
10.75 RPL36A NP_001186902;NP_066357 RL36A_HUMAN 10.75 4
10.67 AMOT NP_001106962;NP_573572 AMOT_HUMAN 10.67 3
10.66 POTEF NP_001093241 POTEF_HUMAN 10.66 29
10.55 PRPS2 NP_001034180;NP_002756 PRPS2_HUMAN 10.55 11
10.29 TUBB2B NP_821080 TBB2B_HUMAN 10.29 28
10.25 MYO1D NP_056009 MYO1D_HUMAN 10.25 4
10.23 RPL7 NP_000962 RL7_HUMAN 10.23 13
10.21 EIF4B NP_001408;XP_003403694 IF4B_HUMAN 10.21 19
10.2 RPS4X NP_000998 RS4X_HUMAN 10.2 20
10.14 TUBB2A NP_001060 TBB2A_HUMAN 10.14 28
10.09 H2AFZ NP_002097 H2AZ_HUMAN 10.09 22
10.09 H2AFV NP_036544;NP_619541 H2AV_HUMAN 10.09 22
10.0 SKIV2L NP_008860 SKIV2_HUMAN 10.0 1
10.0 PRPSAP2 NP_002758 KPRB_HUMAN 10.0 11
10.0 NOP2 NP_001028886;NP_006161 NOP2_HUMAN 10.0 2
9.93 RPL4 NP_000959 RL4_HUMAN 9.93 15
9.92 KRT6B NP_005546 K2C6B_HUMAN 9.92 25
9.83 ACTN1 NP_001093;NP_001123476 ACTN1_HUMAN 9.83 6
9.64 RPS6 NP_001001 RS6_HUMAN 9.64 11
9.55 KRT16 NP_005548 K1C16_HUMAN 9.55 20
9.52 RPS3 NP_000996 RS3_HUMAN 9.52 25
9.42 TUBB4 NP_006078 TBB4_HUMAN 9.42 26
9.32 HIST1H2AA NP_734466 H2A1A_HUMAN 9.32 22
9.29 KRT5 NP_000415 K2C5_HUMAN 9.29 21
9.26 RPLP0 NP_000993;NP_444505 RLA0_HUMAN;RLA0L_HUMAN 9.26 19
9.24 HSPA8 NP_006588;NP_694881 HSP7C_HUMAN 9.24 29
9.23 H2AFX NP_002096 H2AX_HUMAN 9.23 22
9.0 RPL37 NP_000988 RL37_HUMAN 9.0 1
9.0 RPL36AL NP_000992 RL36L_HUMAN 9.0 3
9.0 RPL32 NP_000985;NP_001007074 RL32_HUMAN 9.0 4
9.0 IVNS1ABP NP_006460 NS1BP_HUMAN 9.0 18
9.0 GNAS NP_000507;NP_001070956 ALEX_HUMAN;GNAS1_HUMAN 9.0 2
9.0 EFHD2 NP_077305 EFHD2_HUMAN 9.0 1
9.0 ACTN3 NP_001095 -- 9.0 1
8.95 THRAP3 NP_005110 TR150_HUMAN 8.95 21
8.93 BCLAF1 NP_001070908;NP_001070909 BCLF1_HUMAN 8.93 14
8.57 MYO1C NP_001074248;NP_001074419 MYO1C_HUMAN 8.57 7
8.55 SPTAN1 NP_001123910;NP_001182461 SPTA2_HUMAN 8.55 20
8.54 gi|310133313|ref|XP_001732863.2| XP_001732863.2 -- 8.54 13
8.5 NBN NP_002476 NBN_HUMAN 8.5 2
8.5 CAPRIN1 NP_005889;NP_976240 CAPR1_HUMAN 8.5 4
8.38 TUBA8 NP_001180343;NP_061816 TBA8_HUMAN 8.38 21
8.36 RPSA NP_001012321;NP_002286 RSSA_HUMAN 8.36 11
8.33 gi|310128310|ref|XP_002346832.2| XP_002346832.2 -- 8.33 3
8.33 gi|310115019|ref|XP_002345931.2| XP_002345931.2 -- 8.33 3
8.3 POTEI XP_933678 ACTBM_HUMAN;POTEI_HUMAN 8.3 27
8.22 RPS3A NP_000997 RS3A_HUMAN 8.22 18
8.13 RPL5 NP_000960 RL5_HUMAN 8.13 15
8.1 SPTBN1 NP_003119;NP_842565 SPTB2_HUMAN 8.1 21
8.07 TRIM21 NP_003132 RO52_HUMAN 8.07 14
8.0 SBF1 NP_002963 MTMR5_HUMAN 8.0 1
8.0 RBM28 NP_001159607;NP_060547 RBM28_HUMAN 8.0 1
8.0 NUFIP2 NP_065823 NUFP2_HUMAN 8.0 3
8.0 MYO5A NP_000250;NP_001135967 MYO5A_HUMAN 8.0 3
8.0 KIAA1967 NP_066997 K1967_HUMAN 8.0 6
8.0 HNRNPA1 NP_002127;NP_112420 ROA1_HUMAN 8.0 23
8.0 GNB2 NP_005264 GBB2_HUMAN 8.0 3
8.0 gi|310112868|ref|XP_001732939.3| XP_001732939.3 -- 8.0 13
8.0 gi|140972063|ref|NP_115984.3| NP_115984.3 -- 8.0 1
7.95 KRT6C NP_775109 K2C6C_HUMAN 7.95 21
7.95 KRT6A NP_005545 K2C6A_HUMAN 7.95 21
7.94 RPS2 NP_002943 RS2_HUMAN 7.94 16
7.92 CORO1C NP_055140 COR1C_HUMAN 7.92 12
7.84 HNRNPK NP_002131;NP_112552 HNRPK_HUMAN 7.84 25
7.68 TUBB3 NP_001184110;NP_006077 TBB3_HUMAN 7.68 25
7.67 RPS9 NP_001004 RS9_HUMAN 7.67 12
7.67 LARP1 NP_056130 -- 7.67 3
7.67 GNB1 NP_002065 GBB1_HUMAN 7.67 3
7.62 POTEJ XP_934799 POTEJ_HUMAN 7.62 26
7.61 PABPC1 NP_002559 PABP1_HUMAN 7.61 18
7.5 SF3B3 NP_036558 SF3B3_HUMAN 7.5 18
7.44 RPL3 NP_000958 RL3_HUMAN 7.44 16
7.42 RPS19 NP_001013 RS19_HUMAN 7.42 19
7.41 RPL13 NP_000968;NP_001230059 RL13_HUMAN 7.41 22
7.4 RPS16 NP_001011 RS16_HUMAN 7.4 20
7.33 HIST2H2AB NP_778235 H2A2B_HUMAN 7.33 21
7.33 gi|310133141|ref|XP_003121076.1| XP_003121076.1 -- 7.33 9
7.33 gi|310118095|ref|XP_003120349.1| XP_003120349.1 -- 7.33 9
7.33 CBR3 NP_001227 CBR3_HUMAN 7.33 3
7.31 RPL18 NP_000970 RL18_HUMAN 7.31 16
7.06 gi|76496472|ref|NP_001029025.1| NP_001029025.1 -- 7.06 16
7.0 PRRC2C NP_055987 PRC2C_HUMAN 7.0 1
7.0 MRE11A NP_005581;NP_005582 MRE11_HUMAN 7.0 3
7.0 HIST1H1A NP_005316 H11_HUMAN 7.0 22
7.0 GTPBP4 NP_036473 NOG1_HUMAN 7.0 1
7.0 GNB2L1 NP_006089 GBLP_HUMAN 7.0 5
7.0 DDX3X NP_001180345;NP_001180346 DDX3X_HUMAN 7.0 13
6.9 MYH10 NP_005955 MYH10_HUMAN 6.9 10
6.9 HSPA1L NP_005518 HS71L_HUMAN 6.9 29
6.9 CMBL NP_620164 CMBL_HUMAN 6.9 10
6.88 MAP1B NP_005900 MAP1B_HUMAN 6.88 8
6.68 RPS8 NP_001003 RS8_HUMAN 6.68 19
6.68 HIST1H1T NP_005314 H1T_HUMAN 6.68 22
6.67 PARP1 NP_001609 PARP1_HUMAN 6.67 15
6.67 HNRNPUL1 NP_008971;NP_653333 HNRL1_HUMAN 6.67 3
6.67 EIF2C2 NP_001158095;NP_036286 AGO2_HUMAN 6.67 3
6.67 EEF1A1 NP_001393 EF1A1_HUMAN;EF1A3_HUMAN 6.67 27
6.6 DDX17 NP_001091974;NP_006377 DDX17_HUMAN 6.6 20
6.57 RPL8 NP_000964;NP_150644 RL8_HUMAN 6.57 14
6.54 DDX21 NP_004719 DDX21_HUMAN 6.54 13
6.5 GNB4 NP_067642 GBB4_HUMAN 6.5 2
6.5 CLNS1A NP_001284 ICLN_HUMAN 6.5 20
6.46 HNRNPC NP_001070910;NP_001070911 HNRPC_HUMAN 6.46 13
6.43 RPS15A NP_001010;NP_001025180 RS15A_HUMAN 6.43 14
6.43 RPL10A NP_009035 RL10A_HUMAN 6.43 14
6.41 TUBB6 NP_115914 TBB6_HUMAN 6.41 17
6.41 RPL27 NP_000979 RL27_HUMAN 6.41 17
6.38 XRCC6 NP_001460 XRCC6_HUMAN 6.38 13
6.38 HNRNPU NP_004492;NP_114032 HNRPU_HUMAN 6.38 26
6.37 ILF3 NP_001131145;NP_004507 ILF3_HUMAN 6.37 19
6.35 SF3B1 NP_001005526;NP_036565 SF3B1_HUMAN 6.35 17
6.33 QPCT NP_036545 QPCT_HUMAN 6.33 15
6.29 RPL9 NP_000652;NP_001020092 RL9_HUMAN 6.29 14
6.26 RPS18 NP_072045 RS18_HUMAN 6.26 23
6.22 gi|42558279|ref|NP_817124.1| NP_817124.1 -- 6.22 18
6.16 HSP90AB1 NP_031381 HS90B_HUMAN 6.16 19
6.14 HNRNPH1 NP_005511 HNRH1_HUMAN 6.14 21
6.04 RPL7A NP_000963 RL7A_HUMAN 6.04 23
6.0 YLPM1 NP_062535 YLPM1_HUMAN 6.0 1
6.0 TOP2B NP_001059 TOP2B_HUMAN 6.0 3
6.0 TNRC6B NP_001020014;NP_001155973 TNR6B_HUMAN 6.0 1
6.0 MYEF2 NP_057216 MYEF2_HUMAN 6.0 1
6.0 GRWD1 NP_113673 GRWD1_HUMAN 6.0 2
6.0 FXR2 NP_004851 FXR2_HUMAN 6.0 1
6.0 DYNC1H1 NP_001367 DYHC1_HUMAN 6.0 7
5.84 HSP90AA1 NP_001017963;NP_005339 HS902_HUMAN;HS90A_HUMAN 5.84 19
5.71 QARS NP_005042 SYQ_HUMAN 5.71 7
5.67 RPS23 NP_001016 RS23_HUMAN 5.67 12
5.67 gi|316983126|ref|NP_001186901.1| NP_001186901.1 -- 5.67 3
5.65 KRT17 NP_000413 K1C17_HUMAN 5.65 17
5.64 PRPS1L1 NP_787082 -- 5.64 11
5.61 KRT13 NP_002265;NP_705694 K1C13_HUMAN 5.61 18
5.61 DDX5 NP_004387 DDX5_HUMAN 5.61 23
5.6 SERBP1 NP_001018077;NP_001018078 PAIRB_HUMAN 5.6 10
5.56 RPS17 NP_001012;NP_001185986 RS17_HUMAN 5.56 18
5.56 RPS17L NP_001012;NP_001185986 RS17L_HUMAN 5.56 18
5.5 RPL18A NP_000971 RL18A_HUMAN 5.5 8
5.5 ACTN2 NP_001094 ACTN2_HUMAN 5.5 2
5.44 FUS NP_001164105;NP_001164408 FUS_HUMAN 5.44 9
5.43 HNRNPA1L2 NP_001011724;NP_001011725 RA1L2_HUMAN 5.43 23
5.33 RPL26 NP_000978 RL26_HUMAN 5.33 15
5.32 PPM1A NP_066283;NP_808820 PPM1A_HUMAN 5.32 19
5.29 CLTC NP_004850 CLH1_HUMAN 5.29 14
5.27 RPL15 NP_002939 RL15_HUMAN 5.27 11
5.25 EWSR1 NP_001156757;NP_001156758 EWS_HUMAN 5.25 4
5.23 HSPA5 NP_005338 GRP78_HUMAN 5.23 26
5.22 RPL23 NP_000969 RL23_HUMAN 5.22 18
5.2 IRS4 NP_003595 IRS4_HUMAN 5.2 5
5.18 RPS15 NP_001009 RS15_HUMAN 5.18 11
5.18 RPS14 NP_001020241;NP_001020242 RS14_HUMAN 5.18 22
5.17 DDX3Y NP_001116137;NP_004651 DDX3Y_HUMAN 5.17 12
5.1 PRPF31 NP_056444 PRP31_HUMAN 5.1 20
5.09 TRIM28 NP_005753 TIF1B_HUMAN 5.09 11
5.07 RPL26L1 NP_057177 RL26L_HUMAN 5.07 14
5.05 KRT28 NP_853513 K1C28_HUMAN 5.05 22
5.0 XRCC5 NP_066964 XRCC5_HUMAN 5.0 14
5.0 TJP1 NP_003248;NP_783297 ZO1_HUMAN 5.0 1
5.0 TFG NP_001007566;NP_001182407 TFG_HUMAN 5.0 1
5.0 RSL1D1 NP_056474 RL1D1_HUMAN 5.0 4
5.0 RRP1B NP_055871 RRP1B_HUMAN 5.0 1
5.0 RPL3L NP_005052 RL3L_HUMAN 5.0 2
5.0 RIOK1 NP_113668;NP_694550 RIOK1_HUMAN 5.0 12
5.0 MYH14 NP_001070654;NP_001139281 MYH14_HUMAN 5.0 3
5.0 LYN NP_001104567;NP_002341 LYN_HUMAN 5.0 1
5.0 LARP4 NP_001164275;NP_001164279 LARP4_HUMAN 5.0 1
5.0 ISOC2 NP_001129673;NP_001129674 ISOC2_HUMAN 5.0 1
5.0 IARS NP_002152;NP_038203 SYIC_HUMAN 5.0 5
5.0 GNAI2 NP_001159897;NP_002061 GNAI2_HUMAN 5.0 2
5.0 gi|283046706|ref|NP_001164274.1| NP_001164274.1 -- 5.0 1
5.0 DAP3 NP_001186778;NP_001186779 RT29_HUMAN 5.0 1
5.0 CORO1B NP_001018080;NP_065174 COR1B_HUMAN 5.0 1
5.0 CBX5 NP_001120793;NP_001120794 CBX5_HUMAN 5.0 1
5.0 C22orf28 NP_055121 RTCB_HUMAN 5.0 6
4.92 RPL10 NP_006004 RL10_HUMAN 4.92 12
4.92 MYL6 NP_066299;NP_524147 MYL6_HUMAN 4.92 13
4.89 RBMX NP_001158275;NP_002130 HNRPG_HUMAN 4.89 18
4.83 CCT5 NP_036205 TCPE_HUMAN 4.83 6
4.82 EPRS NP_004437 SYEP_HUMAN 4.82 11
4.75 RBM14 NP_001185765;NP_001185766 RBM14_HUMAN 4.75 8
4.75 MYO5B NP_001073936 MYO5B_HUMAN 4.75 4
4.75 MDH2 NP_005909 MDHM_HUMAN 4.75 4
4.72 KRT15 NP_002266 K1C15_HUMAN 4.72 18
4.71 RPL19 NP_000972 RL19_HUMAN 4.71 14
4.69 PTBP1 NP_002810;NP_114367 PTBP1_HUMAN 4.69 16
4.69 EEF1A2 NP_001949 EF1A2_HUMAN 4.69 26
4.67 DHX30 NP_055781;NP_619520 DHX30_HUMAN 4.67 3
4.61 STK38L NP_055815 ST38L_HUMAN;STK38_HUMAN 4.61 18
4.57 IGF2BP1 NP_001153895;NP_006537 IF2B1_HUMAN 4.57 14
4.5 SPTBN2 NP_008877 SPTN2_HUMAN 4.5 2
4.5 SNRNP200 NP_054733 U520_HUMAN 4.5 8
4.5 RPL35A NP_000987 RL35A_HUMAN 4.5 10
4.5 PRPF8 NP_006436 PRP8_HUMAN 4.5 12
4.5 DRG1 NP_004138 DRG1_HUMAN 4.5 2
4.5 C11orf84 NP_612480 CK084_HUMAN 4.5 16
4.5 ATAD2 NP_054828 ATAD2_HUMAN 4.5 4
4.48 RPL12 NP_000967 RL12_HUMAN 4.48 23
4.47 ILF2 NP_004506 ILF2_HUMAN 4.47 19
4.44 RPS4Y2 NP_001034656 RS4Y2_HUMAN 4.44 16
4.44 ATP5B NP_001677 ATPB_HUMAN 4.44 16
4.43 CCT8 NP_006576 TCPQ_HUMAN 4.43 7
4.42 THOC4 NP_005773 THOC4_HUMAN 4.42 12
4.41 RPS4Y1 NP_000999 RS4Y1_HUMAN 4.41 17
4.41 HNRNPA0 NP_006796 ROA0_HUMAN 4.41 17
4.4 H2AFY NP_001035248;NP_004884 H2AY_HUMAN 4.4 5
4.39 YBX1 NP_004550 YBOX1_HUMAN 4.39 18
4.36 RPS24 NP_001017;NP_001135754 RS24_HUMAN 4.36 14
4.33 GSTM3 NP_000840 GSTM3_HUMAN 4.33 3
4.32 HNRNPL NP_001005335;NP_001524 HNRPL_HUMAN 4.32 19
4.29 EIF3L NP_001229852;NP_057175 EIF3L_HUMAN 4.29 7
4.25 RPS26 NP_001020 RS26_HUMAN 4.25 8
4.25 RPS20 NP_001014;NP_001139699 RS20_HUMAN 4.25 12
4.25 HNRNPH2 NP_001027565;NP_001186903 HNRH2_HUMAN 4.25 20
4.25 HADHA NP_000173 ECHA_HUMAN 4.25 4
4.23 RPL14 NP_001030168;NP_003964 RL14_HUMAN 4.23 13
4.22 LIMA1 NP_001107018;NP_001107019 LIMA1_HUMAN 4.22 9
4.22 HIST1H2BA NP_733759 H2B1A_HUMAN 4.22 18
4.19 PABPC3 NP_112241 PABP3_HUMAN 4.19 16
4.17 PRKDC NP_001075109;NP_008835 PRKDC_HUMAN 4.17 12
4.17 JUP NP_002221;NP_068831 PLAK_HUMAN 4.17 6
4.14 RPS10 NP_001005;NP_001190174 RS10_HUMAN 4.14 14
4.14 RPL17 NP_000976;NP_001030178 RL17_HUMAN 4.14 14
4.14 HIST1H3J NP_003520;NP_003521 H31_HUMAN 4.14 14
4.14 HIST1H3I NP_003520;NP_003521 H31_HUMAN 4.14 14
4.14 HIST1H3H NP_003520;NP_003521 H31_HUMAN 4.14 14
4.14 HIST1H3G NP_003520;NP_003521 -- 4.14 14
4.14 HIST1H3F NP_003520;NP_003521 -- 4.14 14
4.14 HIST1H3E NP_003520;NP_003521 H31_HUMAN 4.14 14
4.14 HIST1H3D NP_003520;NP_003521 H31_HUMAN 4.14 14
4.14 HIST1H3C NP_003520;NP_003521 -- 4.14 14
4.14 HIST1H3B NP_003520;NP_003521 H31_HUMAN 4.14 14
4.14 HIST1H3A NP_003520;NP_003521 H31_HUMAN 4.14 14
4.14 DBT NP_001909 ODB2_HUMAN 4.14 7
4.11 MARS NP_004981 SYMC_HUMAN 4.11 9
4.11 KRT77 NP_778253 K2C1B_HUMAN 4.11 18
4.11 HSPA6 NP_002146 HSP76_HUMAN 4.11 28
4.09 PRPSAP1 NP_002757 KPRA_HUMAN 4.09 11
4.07 HIST2H3D NP_001005464;NP_001116847 H32_HUMAN 4.07 14
4.07 HIST2H3C NP_001005464;NP_001116847 H32_HUMAN 4.07 14
4.07 HIST2H3A NP_001005464;NP_001116847 H32_HUMAN 4.07 14
4.07 H3F3B NP_002098;NP_005315 H33_HUMAN 4.07 14
4.07 H3F3A NP_002098;NP_005315 H33_HUMAN 4.07 14
4.06 HSPA9 NP_004125 GRP75_HUMAN 4.06 18
4.06 HNRNPF NP_001091674;NP_001091675 HNRPF_HUMAN 4.06 17
4.04 HSPA2 NP_068814 HSP72_HUMAN 4.04 28
4.0 WDR36 NP_644810 WDR36_HUMAN 4.0 1
4.0 TBL3 NP_006444 TBL3_HUMAN 4.0 1
4.0 TACC3 NP_006333 TACC3_HUMAN 4.0 2
4.0 SUPT16H NP_009123 SP16H_HUMAN 4.0 1
4.0 SSRP1 NP_003137 SSRP1_HUMAN 4.0 2
4.0 SRP9 NP_001123912;NP_003124 SRP09_HUMAN 4.0 1
4.0 SPATS2 NP_075559 SPAS2_HUMAN 4.0 1
4.0 SPATS2L NP_001093892;NP_001093893 SPS2L_HUMAN 4.0 1
4.0 SLC1A7 NP_006662 EAA5_HUMAN 4.0 2
4.0 RP9 NP_976033 RP9_HUMAN 4.0 1
4.0 RALY NP_031393;NP_057951 RALY_HUMAN 4.0 2
4.0 PSMD14 NP_005796 PSDE_HUMAN 4.0 1
4.0 PABPC4 NP_001129125;NP_001129126 PABP4_HUMAN 4.0 15
4.0 OLFM3 NP_477518 NOE3_HUMAN 4.0 1
4.0 MYO1A NP_005370 MYO1A_HUMAN 4.0 1
4.0 MYH11 NP_001035202;NP_001035203 MYH11_HUMAN 4.0 6
4.0 LARS NP_064502 SYLC_HUMAN 4.0 9
4.0 HSPD1 NP_002147;NP_955472 CH60_HUMAN 4.0 18
4.0 HDAC6 NP_006035 HDAC6_HUMAN 4.0 1
4.0 GNL3 NP_055181;NP_996561 GNL3_HUMAN 4.0 2
4.0 GNB3 NP_002066 GBB3_HUMAN 4.0 3
4.0 GNAI1 NP_002060 GNAI1_HUMAN 4.0 2
4.0 gi|321117084|ref|NP_001189399.1| NP_001189399.1 -- 4.0 12
4.0 gi|310126544|ref|XP_003120439.1| XP_003120439.1 -- 4.0 2
4.0 gi|310119127|ref|XP_003118559.1| XP_003118559.1 -- 4.0 2
4.0 gi|169164514|ref|XP_001719897.1| XP_001719897.1 -- 4.0 2
4.0 FTSJ3 NP_060117 RRMJ3_HUMAN 4.0 2
4.0 FRYL NP_055845 FRYL_HUMAN 4.0 4
4.0 EFHD1 NP_079478 EFHD1_HUMAN 4.0 1
4.0 DDX6 NP_004388 DDX6_HUMAN 4.0 2
4.0 CPSF7 NP_001129512;NP_001136037 CPSF7_HUMAN 4.0 1
4.0 CENPT NP_079358 CENPT_HUMAN 4.0 1
4.0 CCT7 NP_001009570;NP_001159756 TCPH_HUMAN 4.0 7
4.0 CCT6A NP_001009186;NP_001753 TCPZ_HUMAN 4.0 8
4.0 CAPZB NP_001193469;NP_001193470 CAPZB_HUMAN 4.0 8
4.0 BANF1 NP_001137457;NP_003851 BAF_HUMAN 4.0 2
4.0 AIF1L NP_001172024;NP_001172025 AIF1L_HUMAN 4.0 1
4.0 ACIN1 NP_001158286;NP_001158287 ACINU_HUMAN 4.0 1
3.93 HIST3H3 NP_003484 H31T_HUMAN 3.93 14
3.92 CSDA NP_001138898;NP_003642 DBPA_HUMAN 3.92 13
3.91 NAP1L1 NP_004528;NP_631946 NP1L1_HUMAN 3.91 11
3.89 E2F7 NP_976328 E2F7_HUMAN 3.89 9
3.88 RPL37A NP_000989 RL37A_HUMAN 3.88 8
3.86 RPL23A NP_000975 RL23A_HUMAN 3.86 21
3.86 CCT2 NP_001185771;NP_006422 TCPB_HUMAN 3.86 7
3.85 RCN2 NP_002893 RCN2_HUMAN 3.85 13
3.83 TCP1 NP_001008897;NP_110379 TCPA_HUMAN 3.83 6
3.83 MYBBP1A NP_001099008;NP_055335 MBB1A_HUMAN 3.83 6
3.81 RPS11 NP_001006 RS11_HUMAN 3.81 16
3.8 SYNCRIP NP_001153145;NP_001153148 HNRPQ_HUMAN 3.8 15
3.8 CKAP5 NP_001008938;NP_055571 CKAP5_HUMAN 3.8 5
3.8 CCT3 NP_001008800;NP_005989 TCPG_HUMAN 3.8 5
3.76 RPL21 NP_000973 RL21_HUMAN 3.76 21
3.75 RPL31 NP_000984;NP_001092047 RL31_HUMAN 3.75 16
3.75 HNRNPCL1 NP_001013653;NP_001130033 HNRCL_HUMAN 3.75 8
3.75 gi|113430845|ref|XP_001129414.1| XP_001129414.1 -- 3.75 12
3.75 ENO1 NP_001188412;NP_001419 ENOA_HUMAN 3.75 4
3.75 EIF3M NP_006351 EIF3M_HUMAN 3.75 4
3.73 RPLP1 NP_000994;NP_998890 RLA1_HUMAN 3.73 22
3.73 RPL24 NP_000977 RL24_HUMAN 3.73 11
3.73 gi|228008398|ref|NP_001153146.1| NP_001153146.1 -- 3.73 15
3.73 gi|228008295|ref|NP_001153147.1| NP_001153147.1 -- 3.73 15
3.71 KRT19 NP_002267 K1C19_HUMAN 3.71 17
3.71 DSP NP_001008844;NP_004406 DESP_HUMAN 3.71 7
3.69 YBX2 NP_057066 YBOX2_HUMAN 3.69 13
3.67 YES1 NP_005424 YES_HUMAN 3.67 3
3.67 RPS7 NP_001002 RS7_HUMAN 3.67 15
3.67 RPL34 NP_000986;NP_296374 RL34_HUMAN 3.67 9
3.67 PSMC3 NP_002795 PRS6A_HUMAN 3.67 3
3.67 JAK1 NP_002218 JAK1_HUMAN 3.67 3
3.67 GEMIN4 NP_056536 GEMI4_HUMAN 3.67 3
3.67 EIF3E NP_001559 EIF3E_HUMAN 3.67 6
3.67 DSG2 NP_001934 DSG2_HUMAN 3.67 3
3.67 CTTN NP_001171669;NP_005222 SRC8_HUMAN 3.67 3
3.63 TUBB1 NP_110400 TBB1_HUMAN 3.63 16
3.63 KRT4 NP_002263 K2C4_HUMAN 3.63 8
3.63 EIF3A NP_003741 EIF3A_HUMAN 3.63 8
3.63 ATP5A1 NP_001001937;NP_004037 ATPA_HUMAN 3.63 16
3.6 RPL28 NP_000982;NP_001129606 RL28_HUMAN 3.6 10
3.6 gi|55770868|ref|NP_064424.3| NP_064424.3 -- 3.6 15
3.58 EEF1G NP_001395 EF1G_HUMAN 3.58 12
3.57 gi|310114721|ref|XP_003119987.1| XP_003119987.1 -- 3.57 14
3.57 gi|169218225|ref|XP_946578.2| XP_946578.2 -- 3.57 7
3.57 EIF3F NP_003745 EIF3F_HUMAN 3.57 7
3.57 EIF3B NP_001032360;NP_003742 EIF3B_HUMAN 3.57 7
3.53 KRT24 NP_061889 K1C24_HUMAN 3.53 17
3.52 SNRPD1 NP_008869 SMD1_HUMAN 3.52 25
3.52 KRT27 NP_853515 K1C27_HUMAN 3.52 21
3.52 KRT25 NP_853512 K1C25_HUMAN 3.52 21
3.5 VCP NP_009057 TERA_HUMAN 3.5 10
3.5 SRC NP_005408;NP_938033 SRC_HUMAN 3.5 2
3.5 RBM3 NP_006734 RBM3_HUMAN 3.5 2
3.5 NOLC1 NP_004732 NOLC1_HUMAN 3.5 6
3.5 MYL9 NP_006088;NP_852667 MYL9_HUMAN 3.5 6
3.5 MRPS34 NP_076425 RT34_HUMAN 3.5 2
3.5 HNRNPH3 NP_036339;NP_067676 HNRH3_HUMAN 3.5 4
3.5 G3BP2 NP_036429;NP_987100 G3BP2_HUMAN 3.5 2
3.5 FYN NP_001229708;NP_002028 FYN_HUMAN 3.5 2
3.5 EXOSC10 NP_001001998;NP_002676 EXOSX_HUMAN 3.5 2
3.5 DDX41 NP_057306 DDX41_HUMAN 3.5 2
3.5 ARPC4 NP_001020130;NP_001020131 ARPC4_HUMAN 3.5 2
3.5 ARPC2 NP_005722;NP_690601 ARPC2_HUMAN 3.5 2
3.5 ACTR1A NP_005727 ACTZ_HUMAN 3.5 2
3.44 KRT76 NP_056932 K22O_HUMAN 3.44 16
3.44 DBN1 NP_004386;NP_543157 DREB_HUMAN 3.44 9
3.4 ZRANB2 NP_005446;NP_976225 ZRAB2_HUMAN 3.4 5
3.4 GAPDH NP_002037 G3P_HUMAN 3.4 10
3.4 DDX1 NP_004930 DDX1_HUMAN 3.4 5
3.35 SNRPN NP_003088;NP_073716 RSMN_HUMAN 3.35 17
3.35 SNRPB NP_003082;NP_937859 RSMB_HUMAN 3.35 17
3.33 STAU1 NP_001032405;NP_004593 STAU1_HUMAN 3.33 6
3.33 SRSF9 NP_003760 SRSF9_HUMAN 3.33 3
3.33 PSMD6 NP_055629 PSMD6_HUMAN 3.33 3
3.33 FLG2 NP_001014364 FILA2_HUMAN 3.33 3
3.33 ELAVL1 NP_001410 ELAV1_HUMAN 3.33 6
3.33 EIF3H NP_003747 EIF3H_HUMAN 3.33 3
3.3 HNRNPD NP_001003810;NP_002129 HNRPD_HUMAN 3.3 20
3.27 KRT75 NP_004684 K2C75_HUMAN 3.27 22
3.25 NEFM NP_001099011;NP_005373 NFM_HUMAN 3.25 8
3.25 gi|310133085|ref|XP_001718487.2| XP_001718487.2 -- 3.25 8
3.25 EIF5B NP_056988 IF2P_HUMAN 3.25 4
3.25 DDX18 NP_006764 DDX18_HUMAN 3.25 4
3.25 CFL2 NP_068733;NP_619579 COF2_HUMAN 3.25 4
3.21 RPS13 NP_001008 RS13_HUMAN 3.21 14
3.2 TAF15 NP_003478;NP_631961 RBP56_HUMAN 3.2 5
3.2 EIF4A1 NP_001191439;NP_001407 IF4A1_HUMAN 3.2 5
3.2 EIF2S2 NP_003899 IF2B_HUMAN;IF2BL_HUMAN 3.2 5
3.18 H3F3C NP_001013721 H3C_HUMAN 3.18 11
3.17 RPS12 NP_001007 RS12_HUMAN 3.17 12
3.16 RPS25 NP_001019 RS25_HUMAN 3.16 19
3.16 HNRNPA3 NP_919223 ROA3_HUMAN 3.16 19
3.14 EIF3C NP_001032897;NP_001186071 EIF3C_HUMAN 3.14 7
3.14 EIF3CL NP_001093131 -- 3.14 7
3.13 SF3B2 NP_006833 SF3B2_HUMAN 3.13 16
3.13 MYL12B NP_001138416;NP_001138417 ML12B_HUMAN 3.13 15
3.13 MYL12A NP_006462 ML12A_HUMAN 3.13 15
3.13 MATR3 NP_001181883;NP_001181884 MATR3_HUMAN 3.13 15
3.08 HNRPDL NP_001193929;NP_112740 HNRDL_HUMAN 3.08 12
3.07 DHX15 NP_001349 DHX15_HUMAN 3.07 14
3.0 U2AF1 NP_001020374;NP_001020375 U2AF1_HUMAN 3.0 2
3.0 TSR1 NP_060598 TSR1_HUMAN 3.0 2
3.0 TOP1 NP_003277 TOP1_HUMAN 3.0 2
3.0 TMOD3 NP_055362 TMOD3_HUMAN 3.0 9
3.0 TIAL1 NP_001029097;NP_003243 TIAR_HUMAN 3.0 2
3.0 TIA1 NP_071320;NP_071505 TIA1_HUMAN 3.0 2
3.0 SRP72 NP_008878 SRP72_HUMAN 3.0 1
3.0 SPTBN4 NP_066022;NP_079489 SPTN4_HUMAN 3.0 1
3.0 SPIN1 NP_006708 SPIN1_HUMAN 3.0 20
3.0 SNAP23 NP_003816;NP_570710 SNP23_HUMAN 3.0 1
3.0 RAC1 NP_008839;NP_061485 RAC1_HUMAN 3.0 1
3.0 PSMD2 NP_002799 PSMD2_HUMAN 3.0 7
3.0 PSMC2 NP_001191382;NP_002794 PRS7_HUMAN 3.0 7
3.0 PCBP2 NP_001092090;NP_001122383 PCBP2_HUMAN 3.0 3
3.0 NSUN2 NP_001180384;NP_060225 NSUN2_HUMAN 3.0 2
3.0 NCOA5 NP_066018 NCOA5_HUMAN 3.0 1
3.0 MYO5C NP_061198 MYO5C_HUMAN 3.0 2
3.0 MTHFD1 NP_005947 C1TC_HUMAN 3.0 1
3.0 MTHFD1L NP_001229696;NP_001229697 C1TM_HUMAN 3.0 3
3.0 MRPS22 NP_064576 RT22_HUMAN 3.0 2
3.0 LARP4B NP_055970 LAR4B_HUMAN 3.0 1
3.0 KRT79 NP_787028 K2C79_HUMAN 3.0 19
3.0 GSTM5 NP_000842 GSTM5_HUMAN 3.0 1
3.0 GNG5 NP_005265 GBG5_HUMAN 3.0 1
3.0 GNG12 NP_061329 GBG12_HUMAN 3.0 4