diff --git a/highspec/get_db.sh b/highspec/get_db.sh index bcdf19e42dc921516315abc0ff9a5d0401173501..edc631ca0e8389b02e574df81fb476413a124273 100644 --- a/highspec/get_db.sh +++ b/highspec/get_db.sh @@ -3,19 +3,19 @@ mountpoint=/media/disk1 # get compressed graph db from S3 echo "Getting compressed graph db from S3 - START" date -aws s3 --region=us-east-2 cp s3://ebi-pdbe/neo4j/graph.db.tgz $mountpoint/ +aws s3 --region=us-east-2 cp s3://ebi-pdbe/neo4j/graph.db.bzip2 $mountpoint/ date echo "Getting compressed graph db from S3 - END" -mv $mountpoint/graph.db.tgz $mountpoint/neo4j_data/databases/graph.db/ +mv $mountpoint/graph.db.bzip2 $mountpoint/neo4j_data/databases/graph.db/ # uncompress graph data echo "Uncompress graph db - START" cd $mountpoint/neo4j_data/databases/graph.db date -pbzip2 -dc graph.db.tgz | tar x +pbzip2 -dc graph.db.bzip2 | tar x date -rm graph.db.tgz +rm graph.db.bzip2 echo "Uncompress graph db - END" # echo "Starting Neo4J"