From 4448651f67c1d0ee44cf6a57bfb7f2c295824b67 Mon Sep 17 00:00:00 2001 From: Andrew Yates <ayates@ebi.ac.uk> Date: Wed, 20 Mar 2013 09:59:45 +0000 Subject: [PATCH] updating to release 71 --- modules/t/test-genome-DBs/circ/core/meta.txt | 4 +++- modules/t/test-genome-DBs/circ/core/table.sql | 3 ++- modules/t/test-genome-DBs/homo_sapiens/core/meta.txt | 2 ++ modules/t/test-genome-DBs/homo_sapiens/empty/meta.txt | 4 +++- modules/t/test-genome-DBs/homo_sapiens/empty/table.sql | 3 ++- 5 files changed, 12 insertions(+), 4 deletions(-) diff --git a/modules/t/test-genome-DBs/circ/core/meta.txt b/modules/t/test-genome-DBs/circ/core/meta.txt index 91ddc72f33..5255a9360b 100644 --- a/modules/t/test-genome-DBs/circ/core/meta.txt +++ b/modules/t/test-genome-DBs/circ/core/meta.txt @@ -1,4 +1,4 @@ -1 \N schema_version 70 +1 \N schema_version 71 2 1 assembly.default NCBI34 33 1 species.classification Chordata 32 1 species.classification Vertebrata @@ -30,3 +30,5 @@ 79 \N patch patch_69_70_c.sql|column_datatype_consistency 80 \N patch patch_69_70_d.sql|data_file_id_auto_increment 81 \N patch patch_69_70_e.sql|protein_feature_hit_description +82 \N patch patch_70_71_a.sql|schema_version +83 \N patch patch_70_71_b.sql|mapping_set_index diff --git a/modules/t/test-genome-DBs/circ/core/table.sql b/modules/t/test-genome-DBs/circ/core/table.sql index 1bd46b2f2a..b2f67ffe51 100644 --- a/modules/t/test-genome-DBs/circ/core/table.sql +++ b/modules/t/test-genome-DBs/circ/core/table.sql @@ -366,6 +366,7 @@ CREATE TABLE `mapping_set` ( `mapping_set_id` int(10) unsigned NOT NULL, `internal_schema_build` varchar(20) NOT NULL, `external_schema_build` varchar(20) NOT NULL, + PRIMARY KEY (`mapping_set_id`), UNIQUE KEY `mapping_idx` (`internal_schema_build`,`external_schema_build`) ) ENGINE=MyISAM DEFAULT CHARSET=latin1; @@ -424,7 +425,7 @@ CREATE TABLE `meta` ( PRIMARY KEY (`meta_id`), UNIQUE KEY `species_key_value_idx` (`species_id`,`meta_key`,`meta_value`), KEY `species_value_idx` (`species_id`,`meta_value`) -) ENGINE=MyISAM AUTO_INCREMENT=82 DEFAULT CHARSET=latin1; +) ENGINE=MyISAM AUTO_INCREMENT=84 DEFAULT CHARSET=latin1; CREATE TABLE `meta_coord` ( `table_name` varchar(40) CHARACTER SET latin1 COLLATE latin1_bin NOT NULL DEFAULT '', diff --git a/modules/t/test-genome-DBs/homo_sapiens/core/meta.txt b/modules/t/test-genome-DBs/homo_sapiens/core/meta.txt index a03b9f8109..2e7573efd9 100644 --- a/modules/t/test-genome-DBs/homo_sapiens/core/meta.txt +++ b/modules/t/test-genome-DBs/homo_sapiens/core/meta.txt @@ -30,3 +30,5 @@ 75 \N patch patch_69_70_d.sql|data_file_id_auto_increment 76 \N patch patch_69_70_e.sql|protein_feature_hit_description 77 \N schema_type core +78 \N patch patch_70_71_a.sql|schema_version +79 \N patch patch_70_71_b.sql|mapping_set_index diff --git a/modules/t/test-genome-DBs/homo_sapiens/empty/meta.txt b/modules/t/test-genome-DBs/homo_sapiens/empty/meta.txt index def9330c61..09bfdba9ee 100644 --- a/modules/t/test-genome-DBs/homo_sapiens/empty/meta.txt +++ b/modules/t/test-genome-DBs/homo_sapiens/empty/meta.txt @@ -1,4 +1,4 @@ -1 \N schema_version 70 +1 \N schema_version 71 2 1 assembly.default NCBI34 33 1 species.classification Chordata 32 1 species.classification Vertebrata @@ -30,3 +30,5 @@ 79 \N patch patch_69_70_c.sql|column_datatype_consistency 80 \N patch patch_69_70_d.sql|data_file_id_auto_increment 81 \N patch patch_69_70_e.sql|protein_feature_hit_description +82 \N patch patch_70_71_a.sql|schema_version +83 \N patch patch_70_71_b.sql|mapping_set_index diff --git a/modules/t/test-genome-DBs/homo_sapiens/empty/table.sql b/modules/t/test-genome-DBs/homo_sapiens/empty/table.sql index 9435360936..d3d1f0f15a 100644 --- a/modules/t/test-genome-DBs/homo_sapiens/empty/table.sql +++ b/modules/t/test-genome-DBs/homo_sapiens/empty/table.sql @@ -366,6 +366,7 @@ CREATE TABLE `mapping_set` ( `mapping_set_id` int(10) unsigned NOT NULL, `internal_schema_build` varchar(20) NOT NULL, `external_schema_build` varchar(20) NOT NULL, + PRIMARY KEY (`mapping_set_id`), UNIQUE KEY `mapping_idx` (`internal_schema_build`,`external_schema_build`) ) ENGINE=MyISAM DEFAULT CHARSET=latin1; @@ -424,7 +425,7 @@ CREATE TABLE `meta` ( PRIMARY KEY (`meta_id`), UNIQUE KEY `species_key_value_idx` (`species_id`,`meta_key`,`meta_value`), KEY `species_value_idx` (`species_id`,`meta_value`) -) ENGINE=MyISAM AUTO_INCREMENT=82 DEFAULT CHARSET=latin1; +) ENGINE=MyISAM AUTO_INCREMENT=84 DEFAULT CHARSET=latin1; CREATE TABLE `meta_coord` ( `table_name` varchar(40) CHARACTER SET latin1 COLLATE latin1_bin NOT NULL DEFAULT '', -- GitLab