diff --git a/modules/Bio/EnsEMBL/Pipeline/PipeConfig/FlatfileChecker_conf.pm b/modules/Bio/EnsEMBL/Pipeline/PipeConfig/FlatfileChecker_conf.pm index 36f4a48aab4baffd444c7c1621e43e4c9fd43976..1a474a817bcaee79779adda5e8f5a9e6d532f6c7 100644 --- a/modules/Bio/EnsEMBL/Pipeline/PipeConfig/FlatfileChecker_conf.pm +++ b/modules/Bio/EnsEMBL/Pipeline/PipeConfig/FlatfileChecker_conf.pm @@ -8,7 +8,7 @@ use base ('Bio::EnsEMBL::Hive::PipeConfig::HiveGeneric_conf'); sub default_options { my ($self) = @_; - return { + my $h = { # inherit other stuff from the base class %{ $self->SUPER::default_options() }, @@ -17,12 +17,11 @@ sub default_options { ### Defaults - pipeline_name => 'flatfile_dump_check_'.$self->o('format'), + pipeline_name => 'flatfile_dump_check_'.$self->o('type'), - pipeline_db => { - -driver => 'sqlite', - } }; + $h->{pipeline_db}->{-driver} = 'sqlite'; + return $h; } sub pipeline_create_commands {