From f990cd08595747320ee657beb4dc24c2c32789a5 Mon Sep 17 00:00:00 2001
From: Andrew Yates <ayates@ebi.ac.uk>
Date: Mon, 18 Mar 2013 16:19:37 +0000
Subject: [PATCH] Must inherit the param defaults otherwise the code will not
operate as expected
---
modules/Bio/EnsEMBL/Pipeline/Flatfile/DumpTypeFactory.pm | 1 +
1 file changed, 1 insertion(+)
diff --git a/modules/Bio/EnsEMBL/Pipeline/Flatfile/DumpTypeFactory.pm b/modules/Bio/EnsEMBL/Pipeline/Flatfile/DumpTypeFactory.pm
index 4345f5c96e..c15eeaf2c1 100644
--- a/modules/Bio/EnsEMBL/Pipeline/Flatfile/DumpTypeFactory.pm
+++ b/modules/Bio/EnsEMBL/Pipeline/Flatfile/DumpTypeFactory.pm
@@ -50,6 +50,7 @@ use Bio::EnsEMBL::Utils::Scalar qw/wrap_array/;
sub param_defaults {
my ($self) = @_;
return {
+ %{$self->SUPER::param_defaults()},
column_names => ['type','species'],
default_types => [qw/embl genbank/],
};
--
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