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Munge for Chr in HTSAdaptor as was for BAM Adaptor

Marek Szuba requested to merge github/fork/rishidev/feature/HTSAdaptor_Chr into master

Created by: rishidev

Putting in changes to munge_chr_id as was made for BAMAdaptor in a previous PR https://github.com/Ensembl/ensembl-io/pull/22/files

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