move to Bio::DB::HTS module from faidx_xs (!112) · Merge requests · ensembl-gh-mirror / ensembl-rest

Marek Szuba requested to merge github/fork/rishidev/feature/faidx_to_biodbhts into master Feb 25, 2016

Created by: rishidev

Changes have been made to the VEP to use Faidx (FASTA indexing from HTSlib) from Bio::DB::HTS rather than its own module. These changes are to accompany this.

Relevant pull requests are: https://github.com/Ensembl/ensembl-variation/pull/25 https://github.com/Ensembl/ensembl-tools/pull/12

move to Bio::DB::HTS module from faidx_xs

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