Explore projects

Data pipeline to generate the ChEBI Ontology from the ChEBI's Postgres Database.

Ensembl 2020 client

IMPC statistical pipeline docker image

This project contains an API that serves as a proxy of elasticsearch for the interface. It handles the caching, usage statistics, contexts and standardisation of properties.

Frontend code for the new version of ChEBI

Flat file format specification and java API for sequence data.

eard compiler lib&cli; interpreter lib&cli; syntax highlighter; test suite; cli library stubs etc.

Language agnostic RESTful data access to Ensembl data over HTTP

VIRify: detection of phages and eukaryotic viruses from metagenomic and metatranscriptomic assemblies

Onboarding tools, design templates, code and practical resources.

NOTE - DO NOT COMMIT ANYTHING IN THIS REPO, THIS IS MIRROR REPO OF GITHUB. PLEASE COMMIT CHANGES IN GITHUB ONLY.

Miscellaneous R scripts to do: clone analysis via GBC, gene expression analysis on Seurat, cell-cell interactions analysis with CellPhoneDb, gene network inference with SCENIC, demultiplexing with MULTI-Seq barcodes

This project contains the new developments for the main ChEMBL interface using Vue JS. It defines a Nuxt js app that will be used to make a smooth transition between the current code and new developments using Vue JS.

Web components shared between apps. Can be used as a git submodule, while we improve the packaging.

Tools to load data into the ChEMBl Elastic Search cluster, and replicate it.