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Benchmarking dataset of PDB structures (various molecule types, experimental methods, weird cases etc.).

SMBGC detection tool

CEN-tools is an integrative tool that identifies the underlying context that is associated with the essentiality of a gene from large-scale genome-scale CRISPR screens.

In this repository, I am going to share all the data and codes required to reproduce my library gene selection steps for the 2D CRISPR Project (Colorectal and Breast cancer cell lines)

Manuscript submission system project (Europe PMC plus)

A basic Python-based EGA download client

Flat file format specification and java API for sequence data.

Data pipeline to generate the ChEBI Ontology from the ChEBI's Postgres Database.

ChEBI database management

Singularity in HPC

This is the python implementation of CEN-tools, an integrative tool that identifies the underlying context that is associated with the essentiality of a gene from large-scale genome-scale CRISPR screens

Frontend code for the new version of ChEBI