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BioBert model trained on EPMC dataset for NER task

Ensembl 2020 client

This script provides a number of user enhancements to the default interface of RT at EBI, to enable quicker and easier management of tickets.

SMBGC detection tool

CEN-tools is an integrative tool that identifies the underlying context that is associated with the essentiality of a gene from large-scale genome-scale CRISPR screens.

Data pipeline to generate the ChEBI Ontology from the ChEBI's Postgres Database.

Frontend code for the new version of ChEBI

Flat file format specification and java API for sequence data.

In this repository, I am going to share all the data and codes required to reproduce my library gene selection steps for the 2D CRISPR Project (Colorectal and Breast cancer cell lines)

Singularity in HPC

A library for locating and annotating plain text in HTML

A basic Python-based EGA download client

This is the python implementation of CEN-tools, an integrative tool that identifies the underlying context that is associated with the essentiality of a gene from large-scale genome-scale CRISPR screens