GitLab

No longer needed, as the code was merged with pdb-ligand-env component. This repository can be removed.

FunPDBe Validator client that can parse and validate FunPDBe JSON files

A script to check for broken links on the new EMBL.org

Interactive 2D display of ligands and their environment in protein structures. The testing version of the component is available from: http://pdbe.gitdocs.ebi.ac.uk/web-components/ligand-env

Small molecules chemistry toolkit. Documentation is available at Gitlab pages: https://pdbe.gitdocs.ebi.ac.uk/ccdutils/

A basic Python-based EGA download client

This script provides a number of user enhancements to the default interface of RT at EBI, to enable quicker and easier management of tickets.

PUBLIC project to provide public user scripts.

Static pages for the main www.ebi.ac.uk site

NOTE - DO NOT COMMIT ANYTHING IN THIS REPO, THIS IS MIRROR REPO OF GITHUB. PLEASE COMMIT CHANGES IN GITHUB ONLY.

BioBert model trained on EPMC dataset for NER task

This is the codebase for PDBe-KB REST API service

Webin command line submission interface.

EuropePMC Corpus of 300 articles for core entity types

Tree of Life backend configurations for ElasticSearch

Just a some YAML file

Use analytics JS events to track which parts of site a user engages with

Registry service for AMP T2D properties