Create chebi.sdf and chebi_3_stars.sdf
This task is a continuation of #6 (closed). Here we need to create chebi.sdf
and chebi_3_stars.sdf
, those need to have the same information as the current SDF files called: ChEBI_complete.sdf.gz
and ChEBI_complete_3star.sdf.gz
-
chebi.sdf
-> Same information asChEBI_complete.sdf.gz
-
chebi_3_stars.sdf
-> Sames information asChEBI_complete_3star.sdf.gz
.
Update:
When I checked the .sdf
content files I came across multiple differences depending on whether I downloaded .sdf
files from FTP or the compound detail view. Talking with @amalik we reached an agreement on keeping .sdf
content which comes from the compound detail view because it has the same information we already have in the ChEBI ontology, in this way, we are homogenizing .sdf
files and validating consistent between ontology and .sdf
.
To check .sdf
content, please download this example.