Commits · 3e68f3188a2c17de2a64cb5e3f04215d4430ef83 · ensembl-gh-mirror / ensembl-hive · GitLab

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This project is mirrored from https://:*****@github.com/Ensembl/ensembl-hive.git. Pull mirroring updated 1 minute ago.

Jul 11, 2008
- Changed back to use pipeline. So far it should use and old version of the pipeline code · 3e68f318
  jb16 authored 17 years ago
  3e68f318
- Updated to use the RUnnableDB code in ensembl-analysis instead of the one · 8fe3fbca
  jb16 authored 17 years ago
  8fe3fbca
May 28, 2008
- Just getting rid of an extra comma · 3bcd98ee
  Javier Herrero authored 17 years ago
  
  3bcd98ee
- Implement Dynamic behaviour option · 15fbc94f
  Javier Herrero authored 17 years ago
  
  15fbc94f
Apr 18, 2008
- Fails when command fails · cf90f238
  Javier Herrero authored 17 years ago
  
  cf90f238
Mar 12, 2008
- New remove_by_condition_analysis_url method · ace7d563
  Javier Herrero authored 17 years ago
  
  ace7d563
Dec 14, 2007
- adding -o /dev/null · ec2f4717
  Albert Vilella authored 17 years ago
  
  ec2f4717
Nov 16, 2007
- Implement new max_retry_count and failed_job_tolerance parameters in the analysis_stats table · f4531084
  Javier Herrero authored 17 years ago
  
  f4531084
May 22, 2007
- adding check_if_exit_cleanly · eb9c00c3
  Albert Vilella authored 18 years ago
  
  eb9c00c3
Mar 07, 2007
- Change in the monitor table: analyses -> analysis to improve auto-completion... · 60c598cd
  Javier Herrero authored 18 years ago
  60c598cd
Feb 01, 2007
- Add automatic throughput monitoring facility · 4720036d
  Javier Herrero authored 18 years ago
  
  4720036d
Nov 16, 2006
- Fix logic in conditional autoflow · e1c26467
  Javier Herrero authored 18 years ago
  
  e1c26467
Oct 12, 2006
- replaced the remove/delete analysis -- shouldnt be using that unless you know... · a6de0837
  Albert Vilella authored 18 years ago
  a6de0837
- the deletion of the method is done in the right place now - still, be careful... · 2567e962
  Albert Vilella authored 18 years ago
  2567e962
Sep 29, 2006
- adding verbose_stats option · 8381e482
  Albert Vilella authored 18 years ago
  
  8381e482
Sep 04, 2006
- adding remove_analysis option -- adding remove_all synonymous · 7f441172
  Albert Vilella authored 19 years ago
  
  7f441172
- adding a remove_analysis_id method that will DELETE FROM analysis,... · 88c04ec5
  Albert Vilella authored 19 years ago
  88c04ec5
Jun 12, 2006
- Change: create a global variable instead of a "magic number" for the maximum number of retries · 4ad12163
  Javier Herrero authored 19 years ago
  
  4ad12163
Jun 08, 2006
- Change: performs global cleanup after a worker dies unless no global cleanup... · 8400da56
  Javier Herrero authored 19 years ago
  8400da56
May 05, 2006
- Fix bug: calls kill_worker when --killworker option is used · 1ce6c869
  Javier Herrero authored 19 years ago
  
  1ce6c869
Mar 22, 2006
- Now runnable return an array reference rather than an array · c4d0220e
  Abel Ureta-Vidal authored 19 years ago
  
  c4d0220e
Mar 17, 2006
- Added: allows to run a particular job only · 7aa94f23
  Javier Herrero authored 19 years ago
  
  7aa94f23
- Now takes into account lsf_pending jobs if any, before deciding to do a hard... · 1d91f12f
  Abel Ureta-Vidal authored 19 years ago
  1d91f12f
- Clean up a bit the runnable and output subroutines · 15940b3a
  Abel Ureta-Vidal authored 19 years ago
  
  15940b3a
Mar 15, 2006
- Added: POD for Bio::EnsEMBL::Hive::DBSQL::DataflowRuleAdaptor::create_rule() method · 00cf9984
  Javier Herrero authored 19 years ago
  
  00cf9984
- just fixing a couple of typos · 9253a82f
  Albert Vilella authored 19 years ago
  
  9253a82f
Mar 14, 2006
- Closed a loophole regarding file-handle manipulation that sometimes, under · e2d03534
  Kevin Howe authored 19 years ago
  e2d03534
Mar 06, 2006
- In close_and_update_job_output, closed out/err files before checking · 4f35a997
  Kevin Howe authored 19 years ago
  4f35a997
Feb 27, 2006
- Committed Kathryn changes. Added runnable and output subroutine. These should... · 2a4c7df7
  Abel Ureta-Vidal authored 19 years ago
  2a4c7df7
Feb 03, 2006
- When -logic_name is given, now only returns/creates the number of workers... · eb9cd649
  Abel Ureta-Vidal authored 19 years ago
  eb9cd649
- Added an optional Bio::EnsEMBL::Analysis argument to get_num_needed_workers... · 5be4ff3b
  Abel Ureta-Vidal authored 19 years ago
  5be4ff3b
Dec 15, 2005
- Added name option to hive · 1c3e8981
  Javier Herrero authored 19 years ago
  
  1c3e8981
Nov 22, 2005
- removed a residual (pre autocalc of batchsize from runtime statistics) · bd83c1eb
  Jessica Severin authored 19 years ago
  bd83c1eb
Nov 15, 2005
- added index on analysis_job_file.hive_id to speed up delete when table · ccf5d0a5
  Jessica Severin authored 19 years ago
  ccf5d0a5
Nov 07, 2005
- added back in the $self->print_worker(); which will show up in the worker.out file · be009c7f
  Jessica Severin authored 19 years ago
  be009c7f
Nov 04, 2005
- changed reset_all_jobs_for_analysis_id to reset_all_jobs_for_analysis · 357e8e75
  Jessica Severin authored 19 years ago
  357e8e75
- changed display of analysis_stats details to be on by default · f5f7b7c8
  Jessica Severin authored 19 years ago
  f5f7b7c8
Nov 02, 2005
- Enable no_version_check in the registry · 96fb7423
  Abel Ureta-Vidal authored 19 years ago
  
  96fb7423
Oct 25, 2005
- added exception if the analysis.module is undefined · d1154b70
  Jessica Severin authored 19 years ago
  
  d1154b70
Oct 14, 2005
- added options to run the beekeeper and workers from a registry file · 93ed65cc
  Jessica Severin authored 19 years ago
  93ed65cc