Misc. bugfixes in tweak_pipeline.pl
Created by: muffato
Use case
Here are two bugs that I've identified whilst reviewing #62
- The tweak query printed back to the user was showing the string
meadow
instead of the actual meadow type. - The script allowed deleting non-existing pipeline-wide parameters, which was resulting in Perl warnings about undefined values etc
Description
- Print the variable
$meadow_type
instead - This had been fixed on 2.5 but not backported. I simply cherry-picked the commit
Possible Drawbacks
Once this is accepted and merged on the later branches, @mira13 will have to rebase her changes (#62) which may conflict. But it will make her changeset clearer.
Testing
Have you added/modified unit tests to test the changes?
No, there are currently no tests for tweak_pipeline.pl
If so, do the tests pass/fail?
N/A
Have you run the entire test suite and no regression was detected?
Yes, all fine