Merge requests · ensembl-gh-mirror / ensembl-io · GitLab

First try for a VCF4 writer

!48 · created Aug 12, 2016 by Marek Szuba experimental/unified-design
- Merged
- 31
updated Jan 09, 2017
exclude samples with uncalled genotypes

!38 · created May 05, 2016 by Marek Szuba release/84
- Merged
- 2
updated May 06, 2016
Munge for Chr in HTSAdaptor as was for BAM Adaptor

!40 · created May 09, 2016 by Marek Szuba master
- Merged
updated May 09, 2016
don't assume diploid

!4 · created Oct 29, 2014 by Marek Szuba variation
- Merged
updated Oct 29, 2014
call DESTROY to close tabix file

!43 · created May 31, 2016 by Marek Szuba master
- Merged
- 2
updated May 31, 2016
Merging of unified-design with master branches

!68 · created Sep 27, 2018 by Marek Szuba master
- Merged
- 36
updated Dec 17, 2018
exclude samples with uncalled genotypes

!37 · created May 05, 2016 by Marek Szuba master
- Merged
updated May 05, 2016
Feature/blast parser

!1 · created Jul 11, 2014 by Marek Szuba master
- Merged
updated Dec 17, 2018
correct tabix header function called in PairwiseAdaptor.pm

!47 · created Aug 10, 2016 by Marek Szuba master
- Merged
updated Dec 17, 2018
Experimental/unified design

!54 · created Jun 21, 2017 by Marek Szuba experimental/unified-design
- Merged
- 5
updated Jun 30, 2017
Fix of hard coded test data file paths in tests

!63 · created Aug 13, 2018 by Marek Szuba master
- Merged
updated Aug 13, 2018
Update travis harness to point to the correct Bio-HTS lib version

!52 · created May 11, 2017 by Marek Szuba experimental/unified-design
- Merged
- 1
updated May 11, 2017
Improvements to munge_chr_id subroutine in HTSAdaptor

!51 · created Oct 05, 2016 by Marek Szuba master
- Merged
- 1
updated Dec 17, 2018
Rework on how Bio::DB::HTS is used in HTSAdaptor

!55 · created Jun 28, 2017 by Marek Szuba master
- Merged
- 10
updated Jul 19, 2017
Bio::DB::HTS requirements added to README

!36 · created Apr 28, 2016 by Marek Szuba master
- Merged
updated Apr 28, 2016
ENSCORESW-3526 updated metakey provider.* to assembly.provider_*

!111 · created Aug 17, 2020 by Marek Szuba release/102
- Merged
updated Aug 17, 2020
Fix for bug in GTF get_attribute_by_name

!18 · created Aug 21, 2015 by Marek Szuba master
- Merged
updated Aug 21, 2015
104 version bump in testdbs

!113 · created Sep 18, 2020 by Marek Szuba master
- Merged
updated Sep 18, 2020
Changes required to support bigInteract format - ENSWEB-4751

!62 · created Aug 02, 2018 by Marek Szuba master
- Merged
- 8
updated Aug 14, 2018
Respect the html parameter in trackDb file

!19 · created Oct 06, 2015 by Marek Szuba master
- Merged
updated Oct 07, 2015

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