Merge requests · ensembl-gh-mirror / ensembl-io · GitLab

exclude samples with uncalled genotypes

!37 · created May 05, 2016 by Marek Szuba master
- Merged
updated May 05, 2016
htsfile close function added

!35 · created Apr 15, 2016 by Marek Szuba master
- Merged
updated Apr 15, 2016
Existing TABIX functionality via Bio::DB::HTS

!32 · created Mar 14, 2016 by Marek Szuba master
- Merged
- 7
updated Mar 15, 2016
Alter genotype field return type

!30 · created Feb 23, 2016 by Marek Szuba release/83
- Merged
updated Feb 23, 2016
Alter genotype field return type

!29 · created Feb 23, 2016 by Marek Szuba master
- Merged
updated Feb 24, 2016
Meaningful help on HTTP::Tiny errors.

!28 · created Feb 12, 2016 by Dan Sheppard master
- Merged
updated Feb 18, 2016
Feature/htslib adds HTSAdaptor.pm

!25 · created Jan 04, 2016 by Marek Szuba release/83
- Merged
updated Jan 04, 2016
Existing patches to make bigfile fail softly.

!23 · created Dec 03, 2015 by Dan Sheppard master
- Merged
updated Dec 03, 2015
add is_polymorphic method to aid LD genotype retrieval

!26 · created Jan 15, 2016 by Marek Szuba master
- Merged
updated Jan 15, 2016
Remove unnecessary dependencies

!24 · created Dec 11, 2015 by Marek Szuba master
- Merged
updated Dec 11, 2015
code now also checks for Chr

!22 · created Nov 11, 2015 by Marek Szuba master
- Merged
updated May 06, 2016
Support parsing from an already open file handle.

!17 · created Aug 18, 2015 by Marek Szuba master
enhancement
- Merged
- 5
updated Aug 20, 2015
Adding travis-ci tests

!15 · created Aug 18, 2015 by Marek Szuba master
enhancement
- Merged
- 1
updated Aug 20, 2015
- Fixed bug in Fasta parser, where if the sequence wasn't accessed wh…

!21 · created Nov 11, 2015 by Marek Szuba master
- Merged
- 9
updated Dec 17, 2018
Respect the html parameter in trackDb file

!19 · created Oct 06, 2015 by Marek Szuba master
- Merged
updated Oct 07, 2015
Fix for bug in GTF get_attribute_by_name

!18 · created Aug 21, 2015 by Marek Szuba master
- Merged
updated Aug 21, 2015
fix when individual_ids not defined

!5 · created Mar 30, 2015 by Marek Szuba master
- Merged
updated Mar 30, 2015
fix misuse of get_alternatives in get_start

!3 · created Oct 24, 2014 by Marek Szuba variation
- Merged
updated Oct 24, 2014
add non_ref_only option when fetching genotypes

!10 · created Jun 01, 2015 by Marek Szuba master
- Merged
updated Jun 02, 2015
License was not correct. This is an Apache2 project.

!14 · created Aug 17, 2015 by Marek Szuba master
enhancement
- Merged
- 1
updated Aug 20, 2015

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