Existing TABIX functionality via Bio::DB::HTS (!32) · Merge requests · ensembl-gh-mirror / ensembl-io

Marek Szuba requested to merge github/fork/rishidev/feature/biodbhts_tabix into master Mar 14, 2016

Created by: rishidev

This upgrades ensembl-io to use tabix functionality from Bio::DB::HTS (https://github.com/Ensembl/Bio-HTS) and HTSlib to improve performance rather than calling the command line executable. It passes the tabix related t tests but I think these fail for other reasons.

Existing TABIX functionality via Bio::DB::HTS

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