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Support Structural Variants on VEP endpoint

Marek Szuba requested to merge github/fork/willmclaren/master into master

Created by: willmclaren

I'm not sure if I've done the right thing with the docs and conf files, but you can at least pick out the code changes if I haven't.

As an aside there doesn't seem to be a .t file for the vep endpoint. Presumably this needs doing!

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