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New binding matrix endpoint

Marek Szuba requested to merge github/fork/ilavidas/master into master

Created by: ilavidas

  • add BindingMatrix endpoint

  • add unit test for BindingMatrix endpoint

  • update motif feature test in overlap.t

  • add missing ActionClass decorator

  • move package dependancy to the top

  • use Constants for units

  • add support for Weights unit

  • encapsulate conversions in try-catch block

Requirements

  • Filling out the template is required. Any pull request that does not include enough information to be reviewed in a timely manner may be closed at the maintainers' discretion;
  • Review the contributing guidelines for this repository; remember in particular:
    • do not modify code without testing for regression
    • provide simple unit tests to test the changes
    • the PR must not fail unit testing
    • if you're adding/updating documentation of an endpoint, make sure you add/update the necessary parameters to the (template) configuration files in the ensembl-rest_private repo

Description

Using one or more sentences, describe in detail the proposed changes. Add new BindingMatrix endpoint. Update unit test in order to comply with the updated release/94 branch of the ensembl-funcgen repo.

Use case

Describe the problem. Please provide an example representing the motivation behind the need for having these changes in place.

Benefits

If applicable, describe the advantages the changes will have.

Possible Drawbacks

If applicable, describe any possible undesirable consequence of the changes.

Testing

Have you added/modified unit tests to test the changes? Yes If so, do the tests pass/fail? Yes Have you run the entire test suite and no regression was detected? Yes

Changelog

Are you changing the functionality of an endpoint? If so, please give a one line summary for the public facing changelog.

eg. [/xenobiology/orthologs] Added the ability to look up orthologs and paralogs from klingons and andorians

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