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Missing translation end data for variants

Created by: ens-lgil


Spotted that the end data returned by the overlap/translation for the type transcript_variation was wrong: the start = end is only true for SNP, but this not the case for short deletion (spread onto more than 1 amino acid). I believe this is a very old bug (5 years!).

Use case

Example for rs1326874757 (CACCGTCAT/-), it's mapped coordinates on ENSP00000465759 are 995-997 but on REST, the coordinates are 995-995:;content-type=application/json


The REST endpoint will returns the correct coordinates


Added a unit test in t/overlap.t (required to update the variation test DB)

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