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Add MANE support

Marek Szuba requested to merge github/fork/aparton/feature/mane98 into release/98

Created by: aparton

Requirements

  • Filling out the template is required. Any pull request that does not include enough information to be reviewed in a timely manner may be closed at the maintainers' discretion;
  • Review the contributing guidelines for this repository; remember in particular:
    • do not modify code without testing for regression
    • provide simple unit tests to test the changes
    • the PR must not fail unit testing
    • if you're adding/updating documentation of an endpoint, make sure you add/update the necessary parameters to the (template) configuration files in the ensembl-rest_private repo

Description

Switches on support for VEPs MANE flag

Use case

Adds a flag showing the matching refseq transcript if the related transcript is MANE

Benefits

Improves VEP functionality

Possible Drawbacks

None - the VEP changes were in release/97, this is just switching REST on

Testing

Have you added/modified unit tests to test the changes?

No

If so, do the tests pass/fail?

Have you run the entire test suite and no regression was detected?

Yes

Changelog

Are you changing the functionality of an endpoint? If so, please give a one line summary for the public facing changelog.

Added the ability to identify MANE transcripts

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