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- Dec 07, 2012
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Andy Yates authored
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Andy Yates authored
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- Dec 06, 2012
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Andy Yates authored
Counting features over HAPs/Patches/PARs was not working. Fixed by adding a SQL based filtering stage. The normal code will not use this as it is quite nasty
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Magali Ruffier authored
data should rely on protein evidence levels provided by Uniprot
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- Dec 05, 2012
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Steve Trevanion authored
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- Dec 04, 2012
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Andy Yates authored
[ENSCORESW-315]. Fixing a bug where the bind params need to be reused on subsequent queries. MySQL/DBI/DBD::mysql is really bad at warning us when we submit a query with a single ? and no bind parameters (it compensates). Wish it didn't
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Andy Yates authored
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Andy Yates authored
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Andy Yates authored
[ENSCORESW-314]. Synonym lookup bug fixed. Passed coord system id into the lookup rather than the actual coord system name. Bad bad bad
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Andy Yates authored
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Andy Yates authored
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- Dec 03, 2012
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Andy Yates authored
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Andy Yates authored
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Andy Yates authored
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Andy Yates authored
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Andy Yates authored
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Andy Yates authored
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Kieron Taylor authored
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Andy Yates authored
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- Dec 02, 2012
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Andy Yates authored
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- Nov 30, 2012
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Dan Staines authored
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Dan Staines authored
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Dan Staines authored
added a quick_check to enable quick heuristic check to allow rapid processing of genomes where there are no alternative transcripts
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Dan Staines authored
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Andy Yates authored
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Andy Yates authored
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- Nov 29, 2012
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Andy Yates authored
Ordering only by the session's created date failed to realise we could have more than one entry for the same stable id. Ordering now by the score as a way of getting rid of this ambiguity. Issue was picked up by Rhoda running the code on an older MySQL version which consistently exhibited different behaviour to later MySQL versions
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Andy Yates authored
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Andy Yates authored
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Andy Yates authored
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- Nov 28, 2012
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Kevin Howe authored
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James Allen authored
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Andy Yates authored
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Andy Yates authored
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- Nov 27, 2012
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Andy Yates authored
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Andy Yates authored
get_alt_attrib_codes was added as a fresh dependency. This module missed it. We return nothing for this a we don't have alt_attrib codes for variations
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Kieron Taylor authored
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Kieron Taylor authored
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Kieron Taylor authored
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Kieron Taylor authored
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