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Remove variation code

Marek Szuba requested to merge github/fork/at7/remove_variation_code into master

Created by: at7

First part of removing deprecated variation code


Remove deprecated code StrainSlice and StrainSliceAdaptor. Update StrainSlice occurrences in core API to use Variation::StrainSlice

Follow up from this PR: Deprecate AlignStrainSlice and IndividualSlice Possibly move MappedSliceContainer and MappedSlice to Variation API?

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