Push CWL files. (!9) · Merge requests · Microbiome Informatics / emg-viral-pipeline · GitLab

Martin Beracochea requested to merge cwl into dev May 07, 2020

This PR basically has:

CWL code
Fix for https://github.com/EBI-Metagenomics/emg-viral-pipeline/issues/12
Fix for contig length filter for big files was using too much memory (Alex A. reported this), https://github.com/EBI-Metagenomics/emg-viral-pipeline/pull/9/files#diff-339f5a2c4d738fae9dcc004b9ea0487a
Added travis for python scripts and CWL