Deleted pdbeccdutils/computations/__init__.py, pdbeccdutils/computations/parity_method.py, pdbeccdutils/core/__init__.py, pdbeccdutils/core/ccd_reader.py, pdbeccdutils/core/ccd_writer.py, pdbeccdutils/core/component.py, pdbeccdutils/core/depictions.py, pdbeccdutils/core/exceptions.py, pdbeccdutils/core/fragment_library.py, pdbeccdutils/core/models.py, pdbeccdutils/data/coordgen_templates/templates.mae, pdbeccdutils/data/general_templates/adamantane.sdf, pdbeccdutils/data/general_templates/cube.sdf, pdbeccdutils/data/general_templates/decahydrocorrin.sdf, pdbeccdutils/data/general_templates/hem.sdf, pdbeccdutils/data/general_templates/nonbornane.sdf, pdbeccdutils/data/general_templates/phorbine.sdf, pdbeccdutils/data/general_templates/porphin.sdf, pdbeccdutils/data/general_templates/porphycene.sdf, pdbeccdutils/data/general_templates/ru_complex.sdf, pdbeccdutils/data/general_templates/ru_complex2.sdf, pdbeccdutils/data/fragment_library.tsv, pdbeccdutils/helpers/__init__.py, pdbeccdutils/hel...