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  • pdbe
  • ccdutilsccdutils
  • Issues

  • Open 15
  • Closed 34
  • All 49
New issue
  • Priority Created date Updated date Milestone due date Due date Popularity Label priority Manual Title Weight Blocking
  • Overengineered images
    #52 · created Jun 27, 2019 by Lukas Pravda
    • 0
    updated Jun 27, 2019
  • inspect changes to non-inchiable inchi generation
    #49 · created Apr 09, 2019 by Lukas Pravda
    • 0
    updated Apr 09, 2019
  • Create unit tests for new refactoring branch
    #37 · created Mar 26, 2018 by Oliver Smart   refactor ccd_utils with better class structure.   Doing
    • 8
    updated May 22, 2018
  • Deal with issues using the CifFile parser
    #35 · created Nov 05, 2017 by Oliver Smart
    • 2
    updated Nov 05, 2017
  • fragment searching library: check current fragments and add any new   0 of 5 tasks completed
    #33 · created Oct 02, 2017 by Oliver Smart   PDBeChem Backend Processing: get into preproduction   To Do
    • 0
    updated Oct 17, 2017
  • write a document about porphryin remediation
    #32 · created Sep 29, 2017 by Oliver Smart   PDBeChem Backend Processing: get into preproduction   proposals
    • 1
    updated Sep 29, 2017
  • Produce images of named fragments
    #31 · created Sep 28, 2017 by Oliver Smart   PDBeChem Backend Processing: get into preproduction   proposals
    • 0
    updated Oct 01, 2017
  • Agree exact aims for the project and timecourse
    #30 · created Sep 28, 2017 by Oliver Smart   PDBeChem Backend Processing: get into preproduction   To Do
    • 0
    updated Sep 28, 2017
  • Document the existing chemistry-related release processes
    #29 · created Sep 28, 2017 by Oliver Smart   PDBeChem Backend Processing: get into preproduction   To Do
    • 0
    updated Sep 28, 2017
  • process_components_cif separate out functionality to split into individual cif
    #28 · created Sep 27, 2017 by Oliver Smart   PDBeChem Backend Processing: get into preproduction   proposals
    • 0
    updated Sep 28, 2017
  • process_components_cif improve logging output with a summary at the end of the run.
    #27 · created Sep 27, 2017 by Oliver Smart   PDBeChem Backend Processing: get into preproduction   proposals
    • 0
    updated Sep 28, 2017
  • chem.xml add useful rdkit descriptors like number of rotatable bonds
    #22 · created Aug 29, 2017 by Oliver Smart
    • 2
    updated Nov 22, 2018
  • Proof of concept: Mogul report on PDB-CCD ideal coordinates
    #20 · created Jul 13, 2017 by Oliver Smart   development
    • 21
    updated Nov 18, 2017
  • Develop utility command line script to read single cif and write coordinate files/images etc.
    #19 · created Jun 07, 2017 by Oliver Smart   PDBeChem Backend Processing: get into preproduction   Shelved development started
    • 4
    updated Sep 27, 2017
  • Write CML files: *needs to be checked*
    #8 · created May 29, 2017 by Oliver Smart   PDBeChem Backend Processing: get into preproduction   Qi project Shelved development
    • 8
    updated Oct 01, 2017