Commit 41864ab2 authored by Leo Gordon's avatar Leo Gordon
Browse files

full name for family_pipeline.conf

parent b0a8c2c4
......@@ -22,17 +22,17 @@ Summary:
Module-wide, pipeline-wide, analysis-wide and job-wide parameters and their precedence.
* A new init_pipeline.pl script to create and populate pipelines from a perl hash structure.
Tested with long_mult_pipeline.conf and family_pipeline.conf . It works.
Tested with ensembl-hive/docs/long_mult_pipeline.conf and ensembl-compara/scripts/family/family_pipeline.conf . It works.
* Bio::EnsEMBL::Hive::RunnableDB::SystemCmd now supports parameter substitution via #param_name# patterns.
See usage examples in the family_pipeline.conf
See usage examples in the ensembl-compara/scripts/family/family_pipeline.conf
* There is a new Bio::EnsEMBL::Hive::RunnableDB::SqlCmd that does that it says,
and also supports parameter substitution via #param_name# patterns.
See usage examples in the family_pipeline.conf
See usage examples in the ensembl-compara/scripts/family/family_pipeline.conf
* Bio::EnsEMBL::Hive::RunnableDB::JobFactory has 3 modes of operation: inputlist, inputfile, inputquery.
See usage examples in the family_pipeline.conf
See usage examples in the ensembl-compara/scripts/family/family_pipeline.conf
* some rewrite of the Queen/Adaptors code to give us more developmental flexibility
......@@ -40,7 +40,7 @@ Summary:
- partially tested, has some quirks, waiting for a more serious test by Albert
* support for resource requirements in SQL schema, API and on init_pipeline config file level
Tested in the family_pipeline.conf . It works.
Tested in the ensembl-compara/scripts/family/family_pipeline.conf . It works.
3 December, 2009 : Leo Gordon
......
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