removed the input_id functionality from runWorker as both redundant...

removed the input_id functionality from runWorker as both redundant (standaloneJob) and probably not working

modules/Bio/EnsEMBL/Hive/Queen.pm

@@ -112,11 +112,11 @@ sub create_new_worker {
   my ($self, @args) = @_;
 
   my (  $meadow_type, $meadow_name, $process_id, $exec_host,
-        $rc_id, $rc_name, $analysis_id, $logic_name, $job_id, $input_id,
+        $rc_id, $rc_name, $analysis_id, $logic_name, $job_id,
         $no_write, $debug, $worker_log_dir, $hive_log_dir, $job_limit, $life_span, $no_cleanup, $retry_throwing_jobs, $compile_module_once) =
 
  rearrange([qw(meadow_type meadow_name process_id exec_host
-        rc_id rc_name analysis_id logic_name job_id input_id
+        rc_id rc_name analysis_id logic_name job_id
         no_write debug worker_log_dir hive_log_dir job_limit life_span no_cleanup retry_throwing_jobs compile_module_once) ], @args);
 
     if($rc_name) {
@@ -143,24 +143,6 @@ sub create_new_worker {
 
     my $job;
 
-    if($input_id) {
-        if($job_id) {
-            die "You should either define -input_id or -job_id, but not both\n";
-
-        } elsif($analysis_id) {
-            $job = Bio::EnsEMBL::Hive::AnalysisJob->new(
-                -INPUT_ID       => $input_id,
-                -ANALYSIS_ID    => $analysis_id,
-                -DBID           => -1,
-            );
-            print "creating a job outside the database\n";
-            $job->print_job;
-            $debug=1 unless(defined($debug));
-        } else {
-            die "For creating a job outside the database either -analysis_id or -logic_name must also be defined\n";
-        }
-    }
-
     if($job_id) {
         if($analysis_id) {
             die "When you specify -job_id, please omit both -logic_name and -analysis_id to avoid confusion\n";

scripts/runWorker.pl

@@ -20,7 +20,7 @@ my $db_conf = {
 };
 
 my ($reg_conf, $reg_alias, $url);                   # Connection parameters
-my ($rc_id, $rc_name, $analysis_id, $logic_name, $job_id, $input_id);     # Task specification parameters
+my ($rc_id, $rc_name, $analysis_id, $logic_name, $job_id);     # Task specification parameters
 my ($job_limit, $life_span, $no_cleanup, $no_write, $hive_log_dir, $worker_log_dir, $retry_throwing_jobs, $compile_module_once);   # Worker control parameters
 my ($help, $debug);
 
@@ -42,7 +42,6 @@ GetOptions(
            'analysis_id=i'              => \$analysis_id,
            'logic_name=s'               => \$logic_name,
            'job_id=i'                   => \$job_id,
-           'input_id=s'                 => \$input_id,
 
 # Worker control parameters:
            'job_limit|limit=i'          => \$job_limit,
@@ -107,7 +106,6 @@ eval {
          -analysis_id           => $analysis_id,
          -logic_name            => $logic_name,
          -job_id                => $job_id,
-         -input_id              => $input_id,
 
       # Worker control parameters:
          -job_limit             => $job_limit,
@@ -171,9 +169,6 @@ __DATA__
         # Run a specific job (by a local worker process):
     runWorker.pl -url mysql://username:secret@hostname:port/ehive_dbname -job_id 123456
 
-        # Create a job outside the eHive to test the specified input_id
-    runWorker.pl -url mysql://username:secret@hostname:port/ehive_dbname -logic_name fast_blast -input_id '{ "foo" => 1500 }'
-
 =head1 OPTIONS
 
 =head2 Connection parameters:
@@ -195,7 +190,6 @@ __DATA__
     -analysis_id <id>           : pre-specify this worker in a particular analysis defined by database id
     -logic_name <string>        : pre-specify this worker in a particular analysis defined by name
     -job_id <id>                : run a specific job defined by its database id
-    -input_id <string>          : test this input_id on specified analysis (defined either by analysis_id or logic_name)
 
 =head2 Worker control parameters: