Skip to content
Snippets Groups Projects
Select Git revision
  • Bugfix/NullHashKey
  • Bugfix/NullHashKey2
  • Bugfix/NullHashKey3
  • bau/copyright-2024-v2.6
  • bugfix/add_license_key_transform
  • bugfix/bacct_cmd_update
  • bugfix/cleanup_own_workers
  • bugfix/dot_pipeline_name_2.4
  • bugfix/dot_pipeline_name_2.5
  • bugfix/dummy_wait
  • bugfix/ensembl_root_missing
  • bugfix/gnuplot_subscript
  • bugfix/ignore_coverage_failures
  • bugfix/invalid_url
  • bugfix/java_shared_secrets
  • bugfix/lsf_detection
  • bugfix/lsf_test_dates
  • bugfix/misc_doc
  • bugfix/negative_in_progress
  • bugfix/nosy_standalone
  • attic/unique_job
  • attic/collections
  • attic/unique_attempt_2
  • attic/unique_attempt_1
  • attic/attempt
  • sql_schema_97_start
  • sql_schema_96_start
  • sql_schema_95_start
  • attic/smart_scheduler
  • base/version/2.5
  • sql_schema_94_start
  • sql_schema_93_start
  • attic/log_levels
  • sql_schema_92_start
  • sql_schema_91_start
  • attic/hive_script
  • sql_schema_90_start
  • sql_schema_89_start
  • sql_schema_85_start
  • sql_schema_86_start
40 results
You can move around the graph by using the arrow keys.
Created with Raphaël 2.2.024Aug2317161432131Jul25242316329Jun27262522191513111086131May30282322211817121110982123Apr1627Mar2620197124Feb23201615141031Jan208Dec29Nov2825242322211710415Oct23Sep2095125Aug181526Jul201514131286542130Jun2916151473231May2827262524232120191612111095319Apr1814131130Mar292624231817161210921Feb27Jan2120191412111065431Dec282321141326Nov26Oct22191884130Sep2826232221201614131110987432131Aug242320131211109516Jul141312230Jun2928252318171615141310326May20181714131211107654330Apr28272630Mar2624232219108427Feb2625231918171615426Jan2522161111Dec843230Nov271918216Oct1329Sep24232111Aug320Jul1327May13827Apr313Mar15Feb1215Jan9Dec30Oct2922Sep14Aug11Jul28May18Apr12Mar14Dec16Nov22May7Mar1Feb16Nov12Oct29Sep412Jun85May22Mar171514627Feb315Dec22Nov1574225Oct1413126Sep221418Aug161511913Jun26May18Apr22Mar1184bugfix: make sure there is at least a number in the query (reported by Matthieu)renamed to_string into toString for uniformityAdded a "skip_dump" parameter to ease the restoration of a dumptrying to be more careful with references; release jobs' parameters earlierCan copy a database to another databasechange suggested by Matthieu to avoid crashing if the temp_directory has already been deleted by Runnableswitch to module->new() notation everywhere, to simplify text searchesno longer used as individual jobs are no longer specifically blockedremoved honeycomb support because it is no longer used by Compara moduleshopefully will fix the "was not locked with LOCK TABLES" error messagenew changes for the pre-rel69 versionlg4_pre_rel69_2…lg4_pre_rel69_20120802removed the alternative "nowrite" spelling to simplify interfacemade it possible for a standaloneJob to provide Runnables with a functional worker_temp_directory()moved life_cycle() from Worker.pm into Process.pm and now also calling it from standaloneJob.pl (actually removed from Worker)moved life_cycle() from Worker.pm into Process.pm and now also calling it from standaloneJob.plonly add partial timers' measurement if the job completed successfullyif running a worker with a specific job_id, the status is set to READY, but the retry_count is set depending on whether PRE_CLEANUP is needed or notadded two states, PRE_CLEANUP (conditional) and POST_CLEANUP (unconditional) to the life cycle of the JobAt last rename GET_INPUT into FETCH_INPUT for consistency between the schema and the code (it seems to be harder to patch all the accumulated code)added -compile_modules_once flag to test the new (slightly faster and more logical) approachrc_id renamed to resource_class_idfixed reset_failed_jobs/reset_all_jobs and removed remove_analysis_idreplaced rc_id by resource_class_id throughout the schema and added the foreign keys on resource_class_idsupport 'default' as the default resource class (if none is defined) and create the 'default' rc even if not defined in PipeConfigsimplified logic that controls how semaphores are propagates (preparing for semaphore escaping rule support)to please MySQL Workbench (does not like boolean, does not like leading newlines)resource_description is still thereAdded resource_class to the list of removed tableslatest Changelog incorporatedlg4_rel_68_2012…lg4_rel_68_20120626fixed a bug where job failed in COMPILATION state were still set to DONE statusslightly improved outputfixed and cleaned up the code that outputs a list of workersuntested version that corrects the max(dead) by one minute to include the stats on the last workerWith the "DisplayStretched" option on: now draws the mid-point of the semaphores next to the boxes instead of under themNow accepts two parameters on the command line: "start_date" and "end_date"bugfix: now works if the lines in the bacct output do not start with a spaceunnecessary usesmaking _allocate_to_subgraph() a member function allows not to pass $config as a parameter every timeAdded an option to duplicate the tables and include them into their parent boxes in the graphical output of the pipelineremoved commented lines