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Created with Raphaël 2.2.024Nov2322211710415Oct23Sep2095125Aug181526Jul201514131286542130Jun2916151473231May2827262524232120191612111095319Apr1814131130Mar292624231817161210921Feb27Jan2120191412111065431Dec282321141326Nov26Oct22191884130Sep2826232221201614131110987432131Aug242320131211109516Jul141312230Jun2928252318171615141310326May20181714131211107654330Apr28272630Mar2624232219108427Feb2625231918171615426Jan2522161111Dec843230Nov271918216Oct1329Sep24232111Aug320Jul1327May13827Apr313Mar15Feb1215Jan9Dec30Oct2922Sep14Aug11Jul28May18Apr12Mar14Dec16Nov22May7Mar1Feb16Nov12Oct29Sep412Jun85May22Mar171514627Feb315Dec22Nov1574225Oct1413126Sep221418Aug161511913Jun26May18Apr22Mar11843223Feb22211716141098742128Jan191813121187614Dec1310930Nov25242220191817161095427Oct2019181512865430Sepbugfix - branch_name_2_code should return 1 on undefshow the dataflow-generated semaphores on the diagrambugfix: object adaptor now correctly reconstructs dbIDmerge the two ways of running the LongMult pipeline into oneintegrated semaphored fans/funnels into dataflow rulesthis value was returned but never usedremove the per-worker batch_size methodremove the per-worker batch_size flag from scriptsmake num_running_workers updatable by triggers + better updates during worker check-inthese four methods were neither used by Hive nor by Compara codeDBI with versions older than 1.6 are not supportedrelease 65An example pipeline that turns lines of a file into jobs and runs them on the farmextend for other schema typesanalysis_data may be overcrowded with inserts during dataflow with input_id longer than 255 characterscouple of typoscheckout seems to work better than exportIncorporate ENV hash into the tree of possible options in order to be able to "require" a value. And a bit of config inheritance cleanup.Switching from DBI to DBConnection; data_dbc() as the main focus point; standaloneJob.pl examples of basic building blocksshow query/cmd/filename when debug is onsqlite databases do not have a host name, so nothing to display herethe schema did not allow more than one job_message per second from one attempt. This limitation has been removedallow standalone jobs to emit warningsfor the production of rel.64bugfix: more foolproof maths in triggersmoved Worker's call to Queen->safe_synchronize_AnalysisStats into Worker.pm for claritynow it should properly refresh data in the existing objectdo not update counters unnecessarilyformatting and cleanupmore flexible approach: allows to add triggers later by simply by sourcing the triggers fileperform worker counting centrally in the Queendo not update these fields when triggers in placeadded a new beekeeper_extra_cmdline_options() interface method for passing cmdline options to beekeeper.pl/runWorker.ploptional (cmdline-controlled, off-by-default) support of job-counting triggersrenamed procedures.sql and foreign_keys.sql into .mysql equivalentsexperimental: do the job counting immediately by SQL triggers rather than periodically by Perl codeallow automatic dataflow into tables as welldo not perform interval_update if no new jobs were done (to avoid division by zero)lg4_post_rel63_…lg4_post_rel63_20110712no need for the variabledo not perform interval_update if no new jobs were done (to avoid division by zero)