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ensembl-gh-mirror
ensembl-io
Commits
e2571f24
Commit
e2571f24
authored
5 years ago
by
Ameya Chaubal
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e101 test db patch
parent
654d4762
Branches
e101_testdbpatch
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e101 test db patch
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modules/t/test-genome-DBs/homo_sapiens/variation/meta.txt
+3
-1
3 additions, 1 deletion
modules/t/test-genome-DBs/homo_sapiens/variation/meta.txt
modules/t/test-genome-DBs/homo_sapiens/variation/table.sql
+2
-2
2 additions, 2 deletions
modules/t/test-genome-DBs/homo_sapiens/variation/table.sql
with
5 additions
and
3 deletions
modules/t/test-genome-DBs/homo_sapiens/variation/meta.txt
+
3
−
1
View file @
e2571f24
1 \N schema_type variation
2 \N schema_version 10
0
2 \N schema_version 10
1
3 \N patch patch_84_85_a.sql|schema version
4 \N patch patch_84_85_b.sql|create sample_synonym
5 \N patch patch_84_85_c.sql|drop column moltype from variation_synonym
...
...
@@ -51,3 +51,5 @@
51 \N patch patch_99_100_a.sql|schema version
52 \N patch patch_99_100_b.sql|add frequency to structural variation
53 \N patch patch_99_100_c.sql|add class_attrib_id column to phenotype
54 \N patch patch_100_101_a.sql|schema version
55 \N patch patch_100_101_b.sql|Add new data_source_attrib to variation_citation
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modules/t/test-genome-DBs/homo_sapiens/variation/table.sql
+
2
−
2
View file @
e2571f24
...
...
@@ -186,7 +186,7 @@ CREATE TABLE `meta` (
PRIMARY
KEY
(
`meta_id`
),
UNIQUE
KEY
`species_key_value_idx`
(
`species_id`
,
`meta_key`
,
`meta_value`
),
KEY
`species_value_idx`
(
`species_id`
,
`meta_value`
)
)
ENGINE
=
MyISAM
AUTO_INCREMENT
=
5
4
DEFAULT
CHARSET
=
latin1
;
)
ENGINE
=
MyISAM
AUTO_INCREMENT
=
5
6
DEFAULT
CHARSET
=
latin1
;
CREATE
TABLE
`meta_coord`
(
`table_name`
varchar
(
40
)
NOT
NULL
,
...
...
@@ -604,7 +604,7 @@ CREATE TABLE `variation_attrib` (
CREATE
TABLE
`variation_citation`
(
`variation_id`
int
(
10
)
unsigned
NOT
NULL
,
`publication_id`
int
(
10
)
unsigned
NOT
NULL
,
`data_source_attrib`
set
(
'615'
,
'616'
,
'617'
)
DEFAULT
NULL
,
`data_source_attrib`
set
(
'615'
,
'616'
,
'617'
,
'618'
,
'619'
,
'620'
)
DEFAULT
NULL
,
PRIMARY
KEY
(
`variation_id`
,
`publication_id`
),
KEY
`data_source_attrib_idx`
(
`data_source_attrib`
)
)
ENGINE
=
MyISAM
DEFAULT
CHARSET
=
latin1
;
...
...
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