This project is mirrored from https://:*****@github.com/Ensembl/ensembl-io.git.
Pull mirroring updated .
- Mar 30, 2015
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Laurent Gil authored
fix when individual_ids not defined
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William McLaren authored
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- Dec 17, 2014
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Laurent Gil authored
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- Dec 16, 2014
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Laurent Gil authored
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Laurent Gil authored
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Laurent Gil authored
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- Oct 29, 2014
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Laurent Gil authored
don't assume diploid
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William McLaren authored
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- Oct 24, 2014
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Laurent Gil authored
fix misuse of get_alternatives in get_start
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William McLaren authored
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- Oct 08, 2014
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Laurent Gil authored
Add some new features and fixes for the VCF backend code in the Variation API
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William McLaren authored
add some extra methods and gymnastics to make fetching genotypes for a subset of individuals much much faster
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- Sep 19, 2014
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William McLaren authored
add -f to tabix cmd line as some versions of tabix spout warnings about the .tbi being older than the .vcf.gz even when it isn't
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William McLaren authored
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William McLaren authored
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- Jul 14, 2014
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Alessandro Vullo authored
Feature/blast parser
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- Jul 11, 2014
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Alessandro Vullo authored
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Alessandro Vullo authored
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Alessandro Vullo authored
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Alessandro Vullo authored
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Alessandro Vullo authored
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Alessandro Vullo authored
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Alessandro Vullo authored
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Alessandro Vullo authored
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Alessandro Vullo authored
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Alessandro Vullo authored
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Alessandro Vullo authored
Data file to test blast parsing with format specifiers as closely as possible to those used by Ensembl Web team.
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Alessandro Vullo authored
Compara format test file has been produced with the wrong format specifier, rident, instead of nident.
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Alessandro Vullo authored
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Alessandro Vullo authored
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Alessandro Vullo authored
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- Jul 10, 2014
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Alessandro Vullo authored
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Alessandro Vullo authored
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Alessandro Vullo authored
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Alessandro Vullo authored
Robustly get the name of wanted attribute from the method name, either the raw version or the simplified one.
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Alessandro Vullo authored
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Alessandro Vullo authored
format specifiers, reported among the comments.
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Alessandro Vullo authored
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Alessandro Vullo authored
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Alessandro Vullo authored
reassign it by calling the method. Moreover, it could be dangerous in case the method set_fields do not contain as the last instruction the assignment of $self->{fields}, as this will be assigned to whatever the last expression of set_fields is evaluated to.
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