Merge requests · ensembl-gh-mirror / ensembl-io

Changes required to support bigInteract format - ENSWEB-4751

!62 · created Aug 02, 2018 by Marek Szuba master
- Merged
- 8
updated Aug 14, 2018
[ENSCORESW-2708] added pull request template

!58 · created Apr 19, 2018 by Marek Szuba release/93
- Merged
- 3
updated Dec 17, 2018
Yearly copyright update

!73 · created Jan 02, 2019 by Marek Szuba master
- Merged
- 0
updated Jan 07, 2019
Rework on how Bio::DB::HTS is used in HTSAdaptor

!55 · created Jun 28, 2017 by Marek Szuba master
- Merged
- 10
updated Jul 19, 2017
include ftp support for trackhubs

!70 · created Dec 12, 2018 by Marek Szuba release/94
- Merged
- 1
updated Dec 17, 2018
Add cadd parser

!65 · created Sep 13, 2018 by Marek Szuba master
- Merged
- 2
updated Sep 21, 2018
First try for a VCF4 writer

!48 · created Aug 12, 2016 by Marek Szuba experimental/unified-design
- Merged
- 31
updated Jan 09, 2017
Update travis harness to point to the correct Bio-HTS lib version

!52 · created May 11, 2017 by Marek Szuba experimental/unified-design
- Merged
- 1
updated May 11, 2017
Update URL.pm

!41 · created May 20, 2016 by Marek Szuba master
- Merged
- 0
updated May 24, 2016
Update fetch_file in URL.pm

!42 · created May 25, 2016 by Marek Szuba master
- Merged
- 0
updated May 25, 2016
Experimental/unified design

!54 · created Jun 21, 2017 by Marek Szuba experimental/unified-design
- Merged
- 5
updated Jun 30, 2017
Improvements to munge_chr_id subroutine in HTSAdaptor

!51 · created Oct 05, 2016 by Marek Szuba master
- Merged
- 1
updated Dec 17, 2018
correct tabix header function called in PairwiseAdaptor.pm

!47 · created Aug 10, 2016 by Marek Szuba master
- Merged
- 0
updated Dec 17, 2018
EnsEMBL::Web::Tree changed

!49 · created Sep 05, 2016 by Marek Szuba master
- Merged
- 0
updated Dec 17, 2018
[ENSWEB-2126] Extra param size_limit added to avoid loading bix files

!45 · created Jul 13, 2016 by Marek Szuba postreleasefix/85
- Merged
- 0
updated Dec 17, 2018
call DESTROY to close tabix file

!43 · created May 31, 2016 by Marek Szuba master
- Merged
- 2
updated May 31, 2016
Munge for Chr in HTSAdaptor as was for BAM Adaptor

!40 · created May 09, 2016 by Marek Szuba master
- Merged
- 0
updated May 09, 2016
'defined' will return 1 if compression is provided

!31 · created Mar 07, 2016 by Marek Szuba release/84
- Merged
- 0
updated Dec 17, 2018
exclude samples with uncalled genotypes

!38 · created May 05, 2016 by Marek Szuba release/84
- Merged
- 2
updated May 06, 2016
Bio::DB::HTS requirements added to README

!36 · created Apr 28, 2016 by Marek Szuba master
- Merged
- 0
updated Apr 28, 2016