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Commit 015c17b6 authored by Graham McVicker's avatar Graham McVicker
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added seq_region_annotation table, renamed some cols of assembly table

parent d9625dd9
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...@@ -32,29 +32,37 @@ Proposed New/Modified Tables: ...@@ -32,29 +32,37 @@ Proposed New/Modified Tables:
----------------------------- -----------------------------
seq_region seq_region
------- ----------
seq_region_id int seq_region_id int
name varchar name varchar
coord_system varchar (or maybe enum) coord_system varchar (or maybe enum)
version varchar version varchar
default enum(true, false) default enum(true, false)
length int length int
seq_region_annotation
---------------------
seq_region_id int
attrib enum(htg_phase) (possibly varchar, more values needed)
value varchar
dna dna
--- ---
seq_region_id int seq_region_id int
sequence varchar sequence varchar
assembly assembly
-------- --------
seq_region_id_assembled int asm_seq_region_id int
seq_region_id_component int asm_start int
component_start int asm_end int
component_end int cmp_seq_region_id int
assembled_start int cmp_start int
assembly_end int cmp_end int
orientation tinyint (or enum?) ori tinyint (or enum?)
gene gene
---- ----
......
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