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Commit 09644458 authored by Andreas Kusalananda Kähäri's avatar Andreas Kusalananda Kähäri
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Give the jobs their own names (using -J).

parent 92d24d73
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......@@ -36,7 +36,7 @@ fi
print "Submitting percent GC calculation to queue 'normal'"
print "\tThe output from this job goes to the file"
print "\t'${dbname}_gc.out'"
bsub -qnormal -oo ${dbname}_gc.out \
bsub -q normal -J gc_calc -oo ${dbname}_gc.out \
perl ./percent_gc_calc.pl \
-host ${host} \
-port ${port} \
......@@ -47,7 +47,7 @@ bsub -qnormal -oo ${dbname}_gc.out \
print "Submitting gene density calculation to queue 'normal'"
print "\tThe output from this job goes to the file"
print "\t'${dbname}_gene.out'"
bsub -qnormal -oo ${dbname}_gene.out \
bsub -q normal -J gene_density -oo ${dbname}_gene.out \
perl ./gene_density_calc.pl \
-host ${host} \
-port ${port} \
......@@ -58,7 +58,7 @@ bsub -qnormal -oo ${dbname}_gene.out \
print "Submitting repeat coverage calculation to queue 'long'"
print "\tThe output from this job goes to the file"
print "\t'${dbname}_repeat.out'"
bsub -qlong -oo ${dbname}_repeat.out \
bsub -q long -J repeat_cov -oo ${dbname}_repeat.out \
perl ./repeat_coverage_calc.pl \
-host ${host} \
-port ${port} \
......@@ -69,7 +69,7 @@ bsub -qlong -oo ${dbname}_repeat.out \
print "Submitting variation density calculation to queue 'normal'"
print "\tThe output from this job goes to the file"
print "\t'${dbname}_var.out'"
bsub -qnormal -oo ${dbname}_var.out \
bsub -q normal -J var_density -oo ${dbname}_var.out \
perl ./variation_density.pl \
-host ${host} \
-port ${port} \
......@@ -80,7 +80,7 @@ bsub -qnormal -oo ${dbname}_var.out \
print "Submitting seq region stats calculation to queue 'normal'"
print "\tThe output from this job goes to the file"
print "\t'${dbname}_seqreg.out'"
bsub -qnormal -oo ${dbname}_seqreg.out \
bsub -q normal -J seqreg_stats -oo ${dbname}_seqreg.out \
perl ./seq_region_stats.pl \
-host ${host} \
-port ${port} \
......
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