Commit 11799765 authored by Ian Longden's avatar Ian Longden
Browse files

add flag for description set and add new status of MULTI_DELETE to object_xref

parent ef4b13f7
......@@ -295,6 +295,8 @@ CREATE TABLE gene_stable_id (
internal_id INT UNSIGNED NOT NULL,
stable_id VARCHAR(128) NOT NULL,
display_xref_id INT UNSIGNED DEFAULT NULL,
desc_set INT UNSIGNED DEFAULT 0,
PRIMARY KEY (stable_id),
INDEX internal_idx (internal_id)
......@@ -305,6 +307,7 @@ CREATE TABLE transcript_stable_id (
internal_id INT UNSIGNED NOT NULL,
stable_id VARCHAR(128) NOT NULL,
display_xref_id INT UNSIGNED DEFAULT NULL,
PRIMARY KEY (stable_id),
INDEX internal_idx (internal_id)
......@@ -337,7 +340,7 @@ CREATE TABLE object_xref (
'DIRECT', 'SEQUENCE_MATCH',
'INFERRED_PAIR', 'PROBE',
'UNMAPPED', 'COORDINATE_OVERLAP' ),
ox_status ENUM( 'DUMP_OUT','FAILED_PRIORITY', 'FAILED_CUTOFF', 'NO_DISPLAY') NOT NULL DEFAULT 'DUMP_OUT',
ox_status ENUM( 'DUMP_OUT','FAILED_PRIORITY', 'FAILED_CUTOFF', 'NO_DISPLAY', 'MULTI_DELETE') NOT NULL DEFAULT 'DUMP_OUT',
-- set ox_status to 0 if non used priority_xref or failed cutoff
unused_priority INT UNSIGNED,
master_xref_id INT UNSIGNED DEFAULT NULL,
......
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