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Commit 18d76020 authored by Rhoda Kinsella's avatar Rhoda Kinsella
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Added pig and marmoset to list of species to be projected to and removed projections to aedes and

anopheles.
parent 11d37cde
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......@@ -4,11 +4,11 @@ use strict;
# Remember to check/set the various config optons
# ------------------------------ config -------------------------------
my $release = 55;
my $release = 56;
my $base_dir = "/lustre/scratch1/ensembl/rjk/projections/";
my $base_dir = "/lustre/scratch103/ensembl/rjk/projections/";
my $conf = "release_55.ini"; # registry config file, specifies Compara location
my $conf = "release_56.ini"; # registry config file, specifies Compara location
# location of other databases
my $host = "ens-staging";
......@@ -49,6 +49,8 @@ my @names_1_1 = (["human", "chimp" ],
["human", "chicken" ],
["human", "xenopus" ],
["human", "guinea_pig" ],
["human", "pig" ],
["human", "marmoset" ],
["human", "armadillo" ],
["human", "tenrec" ],
["human", "western_european_hedgehog"],
......@@ -92,6 +94,8 @@ my @go_terms = (["human", "mouse" ],
["human", "chimp" ],
["human", "macaque" ],
["human", "guinea_pig" ],
["human", "pig" ],
["human", "marmoset" ],
["human", "bushbaby" ],
["human", "rabbit" ],
["human", "cat" ],
......@@ -107,7 +111,7 @@ my @go_terms = (["human", "mouse" ],
["human", "tree_shrew" ],
["human", "pika" ],
["human", "mouse_lemur" ],
["human", "wallaby" ],
["human", "wallaby" ],
["human", "horse" ],
["human", "orang_utan" ],
["human", "dolphin" ],
......@@ -128,6 +132,8 @@ my @go_terms = (["human", "mouse" ],
["mouse", "chimp" ],
["mouse", "macaque" ],
["mouse", "guinea_pig" ],
["mouse", "pig" ],
["mouse", "marmoset" ],
["mouse", "bushbaby" ],
["mouse", "rabbit" ],
["mouse", "cat" ],
......@@ -158,8 +164,6 @@ my @go_terms = (["human", "mouse" ],
["mouse", "anolis" ],
["rat", "human" ],
["rat", "mouse" ],
["drosophila", "anopheles" ],
["drosophila", "aedes" ],
["danio", "xenopus" ],
["danio", "fugu" ],
["danio", "tetraodon" ],
......
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