new parameters to limit concurrent lsf jobs

misc-scripts/id_mapping/default.conf

@@ -5,7 +5,7 @@ dry_run = 0
 loglevel = DEBUG
 
 ; paths
-basedir = /lustre/work1/ensembl/pm2/idmapping/perl/2008-04-01
+basedir = /lustre/work1/ensembl/pm2/idmapping/perl/2008-04-17
 
 ; prepend this path to your 'log' parameter
 ; will default to "$basedir/log" if not set
@@ -24,6 +24,10 @@ targetuser                  = ensadmin
 targetpass                  = ensembl
 targetdbname                = pm2_pan_troglodytes_core_41_21
 
+; caching
+;cache_method                = build_cache_all
+dump_cache_concurrent_jobs  = 200
+
 ; limit
 ;region                     = chromosome:CHIMP1A:1:1:2000000:1
 ;chromosomes                = 22
@@ -35,9 +39,10 @@ lsf_opt_run                 = "-M3500000 -R'select[type==X86_64 && mem>3500],rus
 ; ScoreBuilder
 min_exon_length             = 15
 exonerate_path              = /usr/local/ensembl/bin/exonerate-0.8.2
-exonerate_threshold         = 0.5
-exonerate_jobs              = 0
 exonerate_bytes_per_job     = 250000
+exonerate_jobs              = 0
+exonerate_concurrent_jobs   = 200
+exonerate_threshold         = 0.5
 exonerate_extra_params      = '--bestn 100'
 transcript_score_threshold  = 0
 synteny_rescore_jobs        = 20