Unbreak.

misc-scripts/xref_mapping/XrefParser/FlybaseParser.pm

@@ -234,24 +234,25 @@ sub run {
             }
           }
         } else {
-          # Be careful!  Some accessions for some of the Dbxref sources
-          # are not case-sensetively unique.  Only store the very first
-          # of each variation of a name and ignore the rest.
-          my $lc_name   = lc($accession);
-          my $good_name = 0;
-          if ( exists( $names{$source_name}{$lc_name} ) ) {
-            # We've seen a variation of this name before...
-            if ( $names{$source_name}{$lc_name} eq $accession ) {
-              # This is our elected variation.
+          foreach my $accession ( @{ $dbxref->{$dbxref_name} } ) {
+            # Be careful!  Some accessions for some of the Dbxref
+            # sources are not case-sensetively unique.  Only store the
+            # very first of each variation of a name and ignore the
+            # rest.
+            my $lc_name   = lc($accession);
+            my $good_name = 0;
+            if ( exists( $names{$source_name}{$lc_name} ) ) {
+              # We've seen a variation of this name before...
+              if ( $names{$source_name}{$lc_name} eq $accession ) {
+                # This is our elected variation.
+                $good_name = 1;
+              }
+            } else {
+              $names{$source_name}{$lc_name} = $accession;
               $good_name = 1;
             }
-          } else {
-            $names{$source_name}{$lc_name} = $accession;
-            $good_name = 1;
-          }
 
-          if ($good_name) {
-            foreach my $accession ( @{ $dbxref->{$dbxref_name} } ) {
+            if ($good_name) {
               my $xref_id;
               if ( exists( $xref_ids{$source_name}{$accession} ) ) {
                 $xref_id = $xref_ids{$source_name}{$accession};
@@ -264,7 +265,7 @@ sub run {
 
               $self->add_direct_xref( $xref_id, $id, $type, '' );
             }
-          }
+          } ## end foreach my $accession ( @{ ...
         } ## end else [ if ( defined($pre_source...
       } ## end if ( exists( $source_name_map...
     } ## end foreach my $dbxref_name ( keys...