Changes to RYO format output needed for calculating identities to go into identity_xref;

misc-scripts/xref_mapping/XrefMapper/Methods/ExonerateBasic.pm

@@ -111,7 +111,7 @@ rm -f /tmp/\$LSB_JOBINDEX.$queryfile /tmp/\$LSB_JOBINDEX.$targetfile /tmp/$outpu
 lsrcp ecs1a:$target /tmp/\$LSB_JOBINDEX.$targetfile
 lsrcp ecs1a:$query  /tmp/\$LSB_JOBINDEX.$queryfile
 
-$exonerate_path /tmp/\$LSB_JOBINDEX.$queryfile /tmp/\$LSB_JOBINDEX.$targetfile --querychunkid \$LSB_JOBINDEX --querychunktotal $num_jobs --showvulgar false --showalignment FALSE --ryo "xref:%qi:%ti:%qab:%qae:%tab:%tae:%C:%s\n" $options_str | grep '^xref' > /tmp/$output
+$exonerate_path /tmp/\$LSB_JOBINDEX.$queryfile /tmp/\$LSB_JOBINDEX.$targetfile --querychunkid \$LSB_JOBINDEX --querychunktotal $num_jobs --showvulgar false --showalignment FALSE --ryo "xref:%qi:%ti:%ei:%ql:%tl:%qab:%qae:%tab:%tae:%C:%s\n" $options_str | grep '^xref' > /tmp/$output
 
 lsrcp /tmp/$output ecs1a:$root_dir/$output