Allow the Xref parsers to read gzip compressed files through a zcat
pipe. Use the command line switch -compressed with xref_parser.pl to do this. The default behaviour (without the -compressed switch) is still to uncompress gzipped files.
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- misc-scripts/xref_mapping/XrefParser/AedesGenBankParser.pm 8 additions, 18 deletionsmisc-scripts/xref_mapping/XrefParser/AedesGenBankParser.pm
- misc-scripts/xref_mapping/XrefParser/AgilentParser.pm 9 additions, 18 deletionsmisc-scripts/xref_mapping/XrefParser/AgilentParser.pm
- misc-scripts/xref_mapping/XrefParser/AnophelesSymbolParser.pm 8 additions, 18 deletions...-scripts/xref_mapping/XrefParser/AnophelesSymbolParser.pm
- misc-scripts/xref_mapping/XrefParser/BaseParser.pm 86 additions, 27 deletionsmisc-scripts/xref_mapping/XrefParser/BaseParser.pm
- misc-scripts/xref_mapping/XrefParser/CCDSParser.pm 9 additions, 19 deletionsmisc-scripts/xref_mapping/XrefParser/CCDSParser.pm
- misc-scripts/xref_mapping/XrefParser/CeleraParser.pm 6 additions, 16 deletionsmisc-scripts/xref_mapping/XrefParser/CeleraParser.pm
- misc-scripts/xref_mapping/XrefParser/CeleraProteinParser.pm 4 additions, 17 deletionsmisc-scripts/xref_mapping/XrefParser/CeleraProteinParser.pm
- misc-scripts/xref_mapping/XrefParser/CeleraTranscriptParser.pm 4 additions, 17 deletions...scripts/xref_mapping/XrefParser/CeleraTranscriptParser.pm
- misc-scripts/xref_mapping/XrefParser/CodelinkParser.pm 7 additions, 17 deletionsmisc-scripts/xref_mapping/XrefParser/CodelinkParser.pm
- misc-scripts/xref_mapping/XrefParser/DatabaseParser.pm 1 addition, 11 deletionsmisc-scripts/xref_mapping/XrefParser/DatabaseParser.pm
- misc-scripts/xref_mapping/XrefParser/EntrezGeneParser.pm 11 additions, 20 deletionsmisc-scripts/xref_mapping/XrefParser/EntrezGeneParser.pm
- misc-scripts/xref_mapping/XrefParser/FastaParser.pm 1 addition, 13 deletionsmisc-scripts/xref_mapping/XrefParser/FastaParser.pm
- misc-scripts/xref_mapping/XrefParser/Flybase_dmel_GFFv3_Parser.pm 13 additions, 10 deletions...ipts/xref_mapping/XrefParser/Flybase_dmel_GFFv3_Parser.pm
- misc-scripts/xref_mapping/XrefParser/GOParser.pm 10 additions, 17 deletionsmisc-scripts/xref_mapping/XrefParser/GOParser.pm
- misc-scripts/xref_mapping/XrefParser/HUGOParser.pm 8 additions, 17 deletionsmisc-scripts/xref_mapping/XrefParser/HUGOParser.pm
- misc-scripts/xref_mapping/XrefParser/HUGO_CCDSParser.pm 8 additions, 16 deletionsmisc-scripts/xref_mapping/XrefParser/HUGO_CCDSParser.pm
- misc-scripts/xref_mapping/XrefParser/HUGO_ENSGParser.pm 9 additions, 17 deletionsmisc-scripts/xref_mapping/XrefParser/HUGO_ENSGParser.pm
- misc-scripts/xref_mapping/XrefParser/IPIParser.pm 9 additions, 17 deletionsmisc-scripts/xref_mapping/XrefParser/IPIParser.pm
- misc-scripts/xref_mapping/XrefParser/IlluminaParser.pm 6 additions, 17 deletionsmisc-scripts/xref_mapping/XrefParser/IlluminaParser.pm
- misc-scripts/xref_mapping/XrefParser/InterproParser.pm 11 additions, 20 deletionsmisc-scripts/xref_mapping/XrefParser/InterproParser.pm
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