Skip to content
Snippets Groups Projects
Commit 2d3ad239 authored by Andy Yates's avatar Andy Yates
Browse files

adding new types for SO

parent 78cb05e7
No related branches found
No related tags found
No related merge requests found
......@@ -119,6 +119,8 @@ my %feature_so_mapping = (
'Bio::EnsEMBL::Transcript' => 'SO:0000673', # transcript
'Bio::EnsEMBL::Exon' => 'SO:0000147',
'Bio::EnsEMBL::Slice' => 'SO:0000001', # region
'Bio::EnsEMBL::SimpleFeature' => 'SO:0001411', # biological_region
'Bio::EnsEMBL::MiscFeature' => 'SO:0001411', # biological_region
'Bio::EnsEMBL::RepeatFeature' => 'SO:0000657', # repeat region
'Bio::EnsEMBL::Variation::VariationFeature' => 'SO:0001060', # sequence variant
'Bio::EnsEMBL::Variation::StructuralVariationFeature' => 'SO:0001537', # structural variant
......
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment